Protein Concepts Dictionary

Tableau information

Concept source:  d1s4ea2  amino acid (a.a.) range (ASP181)(ALA320)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHHHHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP181)  (GLY190) E1
	  (ALA196)  (GLY215) H2
	  (THR223)  (LYS229) H3
	  (PRO232)  (GLY258) H4
	  (ILE260)  (ARG279) H5
	  (GLU284)  (LEU295) H6
	  (TYR298)  (LEU302) E7
	  (GLY309)  (LEU314) E8
	  (ASP316)  (ALA320) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2      115.3°   H2                                                      
H3        4.3°  111.7°   H3                                               
H4     -149.1°  -94.2°  153.2°   H4                                        
H5      -21.1°   94.4°  -17.3° -169.2°   H5                                 
H6      149.9°  -87.1° -150.4°   31.2° -156.1°   H6                          
E7      -30.6°  -97.1°   31.1° -143.0°   28.8°  173.5°   E7                   
E8      160.2°   72.1° -158.7°   36.3° -154.0°  -15.0°  167.7°   E8            
H9       36.3° -148.5°   40.4° -112.9°   57.1°  124.4°  -51.5°  139.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1s4eb2 :   (ASP181)  (PHE335)   [view usage] : d.58.26.7 |Ferredoxin-like |GHMP Kinase, C-terminal domain |Galactokinase |Galactokinase |Pyrococcus furiosus [TaxId: 2261]
 d1s4ed2 :   (ASP181)  (ALA320)   [view usage] : d.58.26.7 |Ferredoxin-like |GHMP Kinase, C-terminal domain |Galactokinase |Galactokinase |Pyrococcus furiosus [TaxId: 2261]
 d1s4eh2 :   (VAL184)  (ALA320)   [view usage] : d.58.26.7 |Ferredoxin-like |GHMP Kinase, C-terminal domain |Galactokinase |Galactokinase |Pyrococcus furiosus [TaxId: 2261]
 d1s4ea2 :   (ASP181)  (ALA320)   [view usage] : d.58.26.7 |Ferredoxin-like |GHMP Kinase, C-terminal domain |Galactokinase |Galactokinase |Pyrococcus furiosus [TaxId: 2261]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.58