Protein Concepts Dictionary

Tableau information

Concept source:  d3a5lc2  amino acid (a.a.) range (ILE175)(ASN296)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHHHEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ILE175)  (ASP179) E1
	  (GLY182)  (GLY197) H2
	  (ALA204)  (GLU214) H3
	  (PHE223)  (SER232) H4
	  (LEU236)  (LEU242) E5
	  (GLN246)  (ASN252) E6
	  (GLU253)  (GLN263) H7
	  (ILE274)  (LYS284) H8
	  (ASP286)  (ASN296) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2       25.7°   H2                                                      
H3      123.2°   98.0°   H3                                               
H4      -28.8°  -30.2°  104.8°   H4                                        
E5      -70.9°  -95.2°  148.0°  -74.0°   E5                                 
E6      125.2°  106.7°  -50.2° -133.7°  149.5°   E6                          
H7      134.3°  137.1°  -86.4° -163.1°  103.2°   46.4°   H7                   
H8      158.7°  154.6°  -70.8°  172.3°  106.2°  -48.5°   24.5°   H8            
H9      -53.4°  -52.7°  -93.0°   25.3°   72.4° -138.0°  170.2°  147.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1p8za2 :   (ILE175)  (ASN296)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1tyqb1 :   (THR179)  (ARG294)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]
 d3ukrb_ :   (THR179)  (ARG294)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]
 d4efha2 :   (ILE175)  (ASN296)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Acanthamoeba castellanii [TaxId: 5755]
 d1lotb2 :   (ILE175)  (ALA295)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1k8kb1 :   (LEU178)  (HIS300)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]
 d2p9sb_ :   (THR179)  (ARG294)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]
 d1kxpa2 :   (ILE175)  (ALA295)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d3ukub_ :   (THR179)  (HIS300)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]
 d3dxmb_ :   (LEU178)  (HIS300)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55