Protein Concepts Dictionary

Tableau information

Concept source:  d1qi4a2  amino acid (a.a.) range (ILE18)(ASN116)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHHHEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE18)   (PHE23) E1
	   (VAL27)   (PRO32) H2
	   (TYR36)   (GLN42) H3
	   (GLN42)   (ASP49) H4
	   (SER52)   (PRO57) E5
	   (PHE63)   (GLY69) E6
	   (SER70)   (GLY74) E7
	   (SER91)  (GLY106) H8
	  (GLY106)  (ASN116) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2      -66.7°   H2                                                      
H3      149.0°   87.3°   H3                                               
H4      145.1°  141.1°  -54.5°   H4                                        
E5      -23.2°  -87.3°  171.8°  129.7°   E5                                 
E6      -75.3° -118.8°  105.4°   71.6°   72.1°   E6                          
E7      112.9°   75.8°  -74.0°  -97.4° -110.5°  165.4°   E7                   
H8      162.3°  108.2°   20.9°  -33.7° -163.1°   93.9°  -80.7°   H8            
E9      -53.4° -116.6°  156.0°  102.0°  -30.5°   66.3° -108.1° -135.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qpka2 :    (ILE18)  (ASN116)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) |Pseudomonas stutzeri [TaxId: 316]
 d1qi5a2 :    (ILE18)  (ASN116)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) |Pseudomonas stutzeri [TaxId: 316]
 d1jdaa2 :    (ILE18)  (ASN116)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) |Pseudomonas stutzeri [TaxId: 316]
 d1qi3a2 :    (ILE18)  (ASN116)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) |Pseudomonas stutzeri [TaxId: 316]
 d1qi4a2 :    (ILE18)  (ASN116)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) |Pseudomonas stutzeri [TaxId: 316]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1