Protein Concepts Dictionary

Tableau information

Concept source:  d1e89a_  amino acid (a.a.) range (HIS5)(ASN104)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHHEHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (HIS5)   (THR11) E1
	   (GLY15)   (TRP19) H2
	   (TRP19)   (GLY30) H3
	   (LYS32)   (ASP37) E4
	   (SER53)   (GLU59) H5
	   (GLU59)   (LEU68) H6
	   (GLY71)   (GLU79) E7
	   (ALA82)   (ARG92) H8
	   (ALA99)  (ASN104) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2      130.9°   H2                                                      
H3      170.6°   41.5°   H3                                               
E4      -21.4°  152.0° -166.4°   E4                                        
H5      132.5°  -60.2°  -52.4°  128.3°   H5                                 
H6     -170.1°  -57.7°  -16.2°  150.3°  -53.9°   H6                          
E7      -29.3°  102.2°  143.8°  -49.8°  117.8°  159.9°   E7                   
H8      132.0°  -92.4°  -52.5°  114.4°  -82.8°  -38.0° -158.8°   H8            
E9      -30.0°  103.7°  144.8°  -48.7°  112.0°  159.9°   -7.4° -162.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2wfma_ :     (GLN9)  (SER111)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |automated matches |Rauvolfia serpentina [TaxId: 4060]
 d3rkta_ :     (MET1)  (ASN104)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
 d1dwoa_ :     (HIS5)  (ASN104)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
 d3rksa_ :     (MET1)  (ASN104)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
 d1y7ib_ :     (GLU3)  (ALA105)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Salicylic acid-binding protein 2 (SABP2) |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d1e89a_ :     (HIS5)  (ASN104)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
 d1eb8b_ :     (MET1)  (ASN104)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
 d1eb8a_ :     (HIS5)  (ASN104)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
 d3stvb_ :    (LYS11)  (SER111)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Lycopersicon hirsutum [TaxId: 283673]
 d1e89b_ :     (MET1)  (ASN104)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Hydroxynitrile lyase |Cassava (Manihot esculenta) [TaxId: 3983]
 d1tqha_ :    (ARG17)  (CYS116)   [view usage] : c.69.1.29 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/lipase |Carboxylesterase Est |Bacillus stearothermophilus [TaxId: 1422]
 d1y7hb_ :     (LYS5)  (ALA105)   [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Salicylic acid-binding protein 2 (SABP2) |Tobacco (Nicotiana tabacum) [TaxId: 4097]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69