Protein Concepts Dictionary

Tableau information

Concept source:  d4j3gd_  amino acid (a.a.) range (THR2)(GLY137)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHHEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (THR2)    (ARG6) E1
	   (LEU13)   (GLU25) H2
	   (LEU38)   (ARG50) H3
	   (PHE53)   (ARG60) E4
	   (VAL65)   (GLY71) E5
	   (GLU84)   (ALA90) E6
	   (GLY97)  (LYS114) H7
	  (HIS116)  (ILE122) E8
	  (ASN126)  (GLY137) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2      -98.3°   H2                                                      
H3      -70.0°  109.2°   H3                                               
E4      161.2°   93.2° -119.9°   E4                                        
E5      -29.0°  -82.5°   53.7°  169.6°   E5                                 
E6      142.2°   96.5° -135.5°  -20.1°  169.6°   E6                          
H7      -31.5° -113.1°   39.8°  150.3°  -31.0°  149.8°   H7                   
E8      118.5°   50.0°  156.7°  -59.5°  122.5°  -51.8°  149.3°   E8            
H9      -78.9° -124.1°  -17.6°  106.7°  -68.6°  119.6°  -47.4° -161.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ozga2 :     (ARG8)  (GLY129)   [view usage] : d.108.1.10 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |EF1021-like |Putative acetyltransferase Ava4977 |Anabaena variabilis [TaxId: 1172]
 d2b4bb_ :     (ALA2)  (GLY144)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Diamine acetyltransferase 1 |Human (Homo sapiens) [TaxId: 9606]
 d4e8ob_ :     (GLY0)  (GLY131)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
 d3cxpa_ :    (GLY38)  (GLY169)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1qsma_ :     (ASN8)  (VAL142)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Histone acetyltransferase HPA2 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1i1dd_ :     (GLY6)  (GLY147)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Glucosamine-phosphate N-acetyltransferase GNA1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1qsmb_ :     (ASN8)  (VAL142)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Histone acetyltransferase HPA2 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ne9a2 :   (GLY180)  (LYS305)   [view usage] : d.108.1.4 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |FemXAB nonribosomal peptidyltransferases |Peptidyltransferase FemX |Weissella viridescens [TaxId: 1629]
 d4e8oa_ :     (GLY0)  (GLY131)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
 d3fb3b_ :     (ASP2)  (LEU124)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
 d4j3gd_ :     (THR2)  (GLY137)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
 d1wwzb_ :     (GLU3)  (GLY140)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein PH1933 |Pyrococcus horikoshii [TaxId: 53953]
 d4jxqa_ :     (MSE1)  (GLY138)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d2jeva_ :     (ALA2)  (GLY144)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4evya_ :     (GLY0)  (GLY130)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Acinetobacter haemolyticus [TaxId: 29430]
 d3fb3a_ :     (ASP2)  (GLY131)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
 d4j3gc_ :     (LEU3)  (GLY137)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
 d1s3za_ :    (SER-1)  (GLY131)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Aminoglycoside N-acetyltransferase AAC(6')-IY |Salmonella enteritidis [TaxId: 149539]
 d2f5ib_ :     (LYS3)  (GLY144)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2fe7b_ :     (THR2)  (GLY136)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |automated matches |Pseudomonas aeruginosa [TaxId: 208963]
 d2b4ba_ :     (PHE4)  (GLY144)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Diamine acetyltransferase 1 |Human (Homo sapiens) [TaxId: 9606]
 d4j3ga_ :     (THR2)  (GLY137)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
 d2b4da_ :     (ALA2)  (GLY144)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Diamine acetyltransferase 1 |Human (Homo sapiens) [TaxId: 9606]
 d4jwpa_ :     (THR2)  (GLY137)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Brucella abortus [TaxId: 359391]
 d1s5ka_ :     (MET1)  (GLY131)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Aminoglycoside N-acetyltransferase AAC(6')-IY |Salmonella enteritidis [TaxId: 149539]
 d2ge3a1 :     (ASP6)  (GLY141)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Probable acetyltransferase Atu2290 |Agrobacterium tumefaciens [TaxId: 358]
 d1s3zb_ :     (MET1)  (GLY131)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Aminoglycoside N-acetyltransferase AAC(6')-IY |Salmonella enteritidis [TaxId: 149539]
 d2ge3b_ :     (THR7)  (GLY141)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |automated matches |Agrobacterium tumefaciens [TaxId: 358]
 d2ge3d_ :     (THR7)  (GLY141)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |automated matches |Agrobacterium tumefaciens [TaxId: 358]
 d2g3ta_ :     (LYS3)  (GLY144)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1s60a_ :    (GLY-2)  (GLY131)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Aminoglycoside N-acetyltransferase AAC(6')-IY |Salmonella enteritidis [TaxId: 149539]
 d3i3ga_ :     (ASP6)  (GLY135)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
 d2f5ia1 :     (LYS3)  (GLY144)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Diamine acetyltransferase 1 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.108