Protein Concepts Dictionary

Tableau information

Concept source:  d3mxta_  amino acid (a.a.) range (ASP141)(PHE266)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEHHHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP141)  (GLY146) E1
	  (ASP149)  (ASN164) H2
	  (LYS168)  (PRO173) E3
	  (SER184)  (TYR189) H4
	  (SER191)  (ALA197) H5
	  (ALA200)  (GLY215) H6
	  (THR219)  (LYS232) H7
	  (LEU235)  (TYR240) E8
	  (ASP257)  (PHE266) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2     -159.8°   H2                                                      
E3      -21.2° -169.6°   E3                                               
H4       35.7°  147.3°  -42.8°   H4                                        
H5       99.5°  -71.6°  -98.4°  135.0°   H5                                 
H6     -105.7°  -66.9° -102.8°  141.4°   -7.2°   H6                          
H7       60.8° -132.2°   57.4°  -29.7°  154.8°  156.7°   H7                   
E8     -132.5°   30.9° -140.4°  152.4°  -44.0°  -41.5°  161.2°   E8            
E9       61.4° -122.6°   67.8°   26.1°  158.2°  165.4°  -24.4°  141.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ejca_ :   (HIS142)  (TRP267)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Thermotoga maritima [TaxId: 2336]
 d3ag6a_ :   (ASP143)  (LYS268)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
 d3ioea_ :   (ASP153)  (ALA272)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d3q10a_ :   (ASP144)  (TRP268)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |automated matches |Yersinia pestis [TaxId: 632]
 d3uk2a_ :   (ARG139)  (ARG242)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
 d3innc_ :   (ASP142)  (GLY270)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Brucella melitensis [TaxId: 29459]
 d3mxta_ :   (ASP141)  (PHE266)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
 d3inna_ :   (ASP142)  (GLY270)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Brucella melitensis [TaxId: 29459]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.26