Protein Concepts Dictionary

Tableau information

Concept source:  d4ef6a_  amino acid (a.a.) range (ASP153)(ALA284)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEHHHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP153)  (GLY158) E1
	  (TYR162)  (ASN176) H2
	  (ALA180)  (PRO185) E3
	  (SER196)  (TYR201) H4
	  (ASP203)  (ALA223) H5
	  (ALA228)  (ALA242) H6
	  (GLY244)  (TYR249) E7
	  (SER265)  (GLY275) E8
	  (ARG278)  (ALA284) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2     -158.8°   H2                                                      
E3      -20.4° -170.2°   E3                                               
H4       31.8°  151.0°  -37.8°   H4                                        
H5      108.4°  -62.8° -107.4°  140.1°   H5                                 
H6       59.1° -131.4°   58.4°  -28.2°  165.8°   H6                          
E7     -135.1°   26.6° -144.7°  152.4°  -41.0° -152.6°   E7                   
E8       57.2° -126.8°   62.8°   25.9°  162.7°  -15.4°  141.3°   E8            
E9     -110.0°   69.6° -101.2° -138.9°  -22.0°  150.3°  -55.6°  162.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ef6a_ :   (ASP153)  (ALA284)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d1n2ba_ :   (ASP153)  (GLY288)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d1n2ja_ :   (ASP153)  (GLY288)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d1n2hb_ :   (ASP153)  (GLY288)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d3n8ha_ :   (ASN142)  (PHE253)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Francisella tularensis [TaxId: 177416]
 d1n2ga_ :   (ASP153)  (GLY288)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d2x3fa_ :   (ASP143)  (GLY281)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Staphylococcus aureus [TaxId: 282458]
 d1mopa_ :   (ASP153)  (GLY288)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d1ufva_ :   (GLN138)  (GLU273)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Thermus thermophilus [TaxId: 274]
 d3qtta_ :   (ASN145)  (PHE256)   [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Francisella tularensis [TaxId: 177416]
 d3imca_ :   (ASP153)  (GLY288)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.26