Protein Concepts Dictionary

Tableau information

Concept source:  d2v7ga_  amino acid (a.a.) range (PRO407)(GLY549)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO407)  (TRP412) E1
	  (LEU417)  (SER431) H2
	  (ALA436)  (ARG442) E3
	  (SER452)  (GLU458) H4
	  (TRP470)  (GLY481) H5
	  (THR484)  (LEU488) E6
	  (GLN500)  (GLY510) E7
	  (THR511)  (GLY537) H8
	  (TYR538)  (GLY549) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2      157.3°   H2                                                      
E3      -36.2° -165.6°   E3                                               
H4      -69.5°   91.6° -102.6°   H4                                        
H5      126.9°  -30.8°  158.5°   70.9°   H5                                 
E6      -59.0°  143.1°  -22.8° -123.5° -162.5°   E6                          
E7      123.6°  -34.9°  159.5°   57.3°   20.1°  175.5°   E7                   
H8      -35.3°  166.4°   12.5°  -95.1°  162.2°   28.4° -152.0°   H8            
H9      109.9°  -48.3° -141.1°   63.1°   17.7° -154.6°   29.8° -145.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1uwkb_ :   (PRO407)  (GLY549)   [view usage] : e.51.1.1 |Urocanase |Urocanase |Urocanase |Urocanate hydratase HutU |Pseudomonas putida [TaxId: 303]
 d1uwka_ :   (PRO407)  (GLY549)   [view usage] : e.51.1.1 |Urocanase |Urocanase |Urocanase |Urocanate hydratase HutU |Pseudomonas putida [TaxId: 303]
 d1uwla_ :   (PRO407)  (GLY549)   [view usage] : e.51.1.1 |Urocanase |Urocanase |Urocanase |Urocanate hydratase HutU |Pseudomonas putida [TaxId: 303]
 d2fknb_ :   (PRO403)  (ASP545)   [view usage] : e.51.1.1 |Urocanase |Urocanase |Urocanase |automated matches |Bacillus subtilis [TaxId: 1423]
 d1w1ua_ :   (PRO407)  (GLY549)   [view usage] : e.51.1.1 |Urocanase |Urocanase |Urocanase |Urocanate hydratase HutU |Pseudomonas putida [TaxId: 303]
 d2fkna_ :   (PRO403)  (ASP545)   [view usage] : e.51.1.1 |Urocanase |Urocanase |Urocanase |automated matches |Bacillus subtilis [TaxId: 1423]
 d2v7ga_ :   (PRO407)  (GLY549)   [view usage] : e.51.1.1 |Urocanase |Urocanase |Urocanase |automated matches |Pseudomonas putida [TaxId: 303]
 d1uwlb_ :   (PRO407)  (GLY549)   [view usage] : e.51.1.1 |Urocanase |Urocanase |Urocanase |Urocanate hydratase HutU |Pseudomonas putida [TaxId: 303]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  e.51