Protein Concepts Dictionary

Tableau information

Concept source:  d3imca_  amino acid (a.a.) range (GLU10)(THR105)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU10)   (ALA16) E1
	   (ALA16)   (GLY31) H2
	   (ARG33)   (THR39) E3
	   (HIS44)   (LYS55) H4
	   (VAL61)   (PHE67) E5
	   (ASN69)   (GLY74) H6
	   (GLY77)   (TYR82) H7
	   (PRO86)   (GLY97) H8
	   (GLU99)  (THR105) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2     -131.0°   H2                                                      
E3      -67.4°  147.6°   E3                                               
H4      105.1°  -35.8°  172.0°   H4                                        
E5      -45.9° -161.6°  -22.3°  150.9°   E5                                 
H6      -68.8° -116.8°  -37.5°  138.2°  -45.3°   H6                          
H7     -155.6°   57.0°  119.6°  -68.4° -135.3°  132.2°   H7                   
H8      134.8°   10.2°  153.0°  -32.5°  171.6°  126.3°   48.8°   H8            
E9      -23.1° -153.1°  -45.8°  127.3°  -23.6°  -58.6° -147.9°  158.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ef6a_ :    (GLU10)  (THR105)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d1n2ba_ :    (GLU10)  (THR105)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d2ejca_ :     (MET1)   (SER94)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Thermotoga maritima [TaxId: 2336]
 d3ioea_ :    (GLU10)  (THR105)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d3ivca_ :    (GLU10)  (THR105)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d1n2ga_ :    (GLU10)  (THR105)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
 d3imca_ :    (GLU10)  (THR105)   [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.26