Protein Concepts Dictionary

Tableau information

Concept source:  d3lfhf_  amino acid (a.a.) range (GLU3)(ILE126)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLU3)    (ILE9) E1
	   (ASP13)   (ILE25) H2
	   (ASN31)   (LEU37) E3
	   (ILE43)   (GLU60) H4
	   (GLU63)   (ASP69) E5
	   (SER74)   (GLU85) H6
	   (VAL88)   (THR92) E7
	   (ASN95)  (SER105) H8
	  (THR111)  (ILE126) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2      133.7°   H2                                                      
E3      -14.9° -148.0°   E3                                               
H4      173.8°   40.3° -170.5°   H4                                        
E5      -23.5°  111.6°  -36.6°  150.4°   E5                                 
H6      143.7°  -82.4°  128.9°  -42.2° -160.5°   H6                          
E7      -46.5°   90.0°  -58.7°  127.5°  -23.0° -156.5°   E7                   
H8     -159.1°  -60.6°  150.1°   25.8° -168.3°   31.1°  150.6°   H8            
H9      -45.0°   89.5°  -58.6°  128.8°  -22.0° -163.5°   -7.9°  148.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3lfhf_ :     (GLU3)  (ILE126)   [view usage] : c.54.1.0 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |automated matches |automated matches |Thermoanaerobacter tengcongensis [TaxId: 273068]
 d3lfhd_ :     (GLU3)  (ILE126)   [view usage] : c.54.1.0 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |automated matches |automated matches |Thermoanaerobacter tengcongensis [TaxId: 273068]
 d3lfhb_ :     (GLU3)  (ILE126)   [view usage] : c.54.1.0 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |automated matches |automated matches |Thermoanaerobacter tengcongensis [TaxId: 273068]
 d3lfhe_ :     (GLU3)  (ILE126)   [view usage] : c.54.1.0 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |automated matches |automated matches |Thermoanaerobacter tengcongensis [TaxId: 273068]
 d3lfhc_ :     (PHE5)  (ILE126)   [view usage] : c.54.1.0 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |automated matches |automated matches |Thermoanaerobacter tengcongensis [TaxId: 273068]
 d3mtqb_ :     (LYS2)  (ILE123)   [view usage] : c.54.1.0 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 272620]
 d3lfha_ :     (GLU3)  (ILE126)   [view usage] : c.54.1.0 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |automated matches |automated matches |Thermoanaerobacter tengcongensis [TaxId: 273068]
 d3mtqa_ :     (GLY0)  (ILE123)   [view usage] : c.54.1.0 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 272620]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.54