Protein Concepts Dictionary

Tableau information

Concept source:  d4j07a_  amino acid (a.a.) range (ARG19)(SER158)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG19)   (SER25) E1
	   (ILE31)   (GLY47) H2
	   (THR52)   (LEU57) E3
	   (GLY58)   (HIS73) H4
	   (ASP74)   (ARG84) E5
	   (PRO88)  (SER109) H6
	  (THR110)  (ASN120) E7
	  (GLU122)  (ARG128) H8
	  (ASP137)  (SER158) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2      170.2°   H2                                                      
E3      -13.8°  171.0°   E3                                               
H4      171.6°  -17.4°  162.3°   H4                                        
E5      -12.4°  159.0°  -20.1° -175.9°   E5                                 
H6      168.6°  -21.1°  157.4°   -5.0° -174.4°   H6                          
E7      -19.7°  150.6°  -29.8°  167.7°   -9.9° -171.7°   E7                   
H8     -157.4°   16.5° -171.2°   25.8° -152.5°   30.8°  142.6°   H8            
H9      149.0°  -39.4°  135.4°  -29.0°  150.5°  -24.3°  157.5°   53.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4j07a_ :    (ARG19)  (SER158)   [view usage] : c.16.1.0 |Lumazine synthase |Lumazine synthase |automated matches |automated matches |Mycobacterium leprae [TaxId: 561304]
 d1hqka_ :    (GLY12)  (LYS151)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Aquifex aeolicus [TaxId: 63363]
 d1kz6e_ :    (ARG19)  (LEU158)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d4j07c_ :    (ARG19)  (ILE160)   [view usage] : c.16.1.0 |Lumazine synthase |Lumazine synthase |automated matches |automated matches |Mycobacterium leprae [TaxId: 561304]
 d4j07d_ :    (ARG19)  (SER158)   [view usage] : c.16.1.0 |Lumazine synthase |Lumazine synthase |automated matches |automated matches |Mycobacterium leprae [TaxId: 561304]
 d4j07e_ :    (ARG19)  (SER158)   [view usage] : c.16.1.0 |Lumazine synthase |Lumazine synthase |automated matches |automated matches |Mycobacterium leprae [TaxId: 561304]
 d4j07b_ :    (ARG19)  (SER158)   [view usage] : c.16.1.0 |Lumazine synthase |Lumazine synthase |automated matches |automated matches |Mycobacterium leprae [TaxId: 561304]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.16