Tableau information
Concept source: d2liva_ amino acid (a.a.) range (ILE3)(THR118)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE3) (GLY9) E1
(ALA16) (GLY37) H2
(LYS43) (ALA52) E3
(ASP54) (GLY69) H4
(LYS71) (GLY75) E5
(SER79) (GLU92) H6
(LEU95) (PRO99) E7
(PRO104) (ARG109) H8
(LEU113) (THR118) E9
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 161.8° H2
E3 -25.5° 172.6° E3
H4 172.3° -21.6° 151.5° H4
E5 -29.0° 132.8° -54.5° 152.7° E5
H6 152.5° -44.4° 128.4° -29.6° -166.3° H6
E7 -43.7° 118.4° -68.9° 136.3° -17.3° -162.0° E7
H8 135.9° -59.0° 114.4° -47.5° -151.1° -18.4° -161.2° H8
E9 -53.1° 109.1° -78.3° 127.2° -25.9° 152.9° -9.3° -157.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4gpaa_ : (CYS132) (VAL244) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3h5vc_ : (PHE127) (VAL242) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Ionotropic glutamate receptor 2 (GluR2) amino-terminal domain (ATD) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1z15a_ : (ILE3) (THR118) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3uk0a_ : (ILE31) (PRO139) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 316057]
d2hqoa_ : (MET1) (PRO98) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Helicobacter pylori [TaxId: 85963]
d2lbpa_ : (ILE3) (ALA118) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Leucine-binding protein |Escherichia coli [TaxId: 562]
d2fr0a2 : (GLY1472) (PRO1614) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Erythromycin synthase, eryAI, 1st ketoreductase module |Saccharopolyspora erythraea [TaxId: 1836]
d3n0xa_ : (LEU19) (THR136) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
d2liva_ : (ILE3) (THR118) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Leucine-,isoleucine-,valine-binding (LIV) protein |Escherichia coli [TaxId: 562]
d3ipca_ : (VAL3) (CYS118) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d3td9a_ : (VAL21) (CYS133) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d1esja1 : (PRO18) (ASN123) [view usage] : c.72.1.2 |Ribokinase-like |Ribokinase-like |Thiamin biosynthesis kinases |Hydroxyethylthiazole kinase (THZ kinase, ThiK) |Bacillus subtilis [TaxId: 1423]
d4n0qb_ : (ILE25) (CYS140) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Brucella melitensis [TaxId: 224914]
d3ip5a_ : (VAL3) (CYS118) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d2pv7a2 : (HIS101) (PHE203) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Prephenate dehydrogenase TyrA |Haemophilus influenzae [TaxId: 727]
d3ucea_ : (THR7) (PRO158) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Vibrio vulnificus [TaxId: 196600]
d4n0qa_ : (ILE25) (CYS140) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Brucella melitensis [TaxId: 224914]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.2, c.93, c.72, c.23