Protein Concepts Dictionary

Tableau information

Concept source:  d1o9la1  amino acid (a.a.) range (ALA57)(SER158)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA57)   (GLY63) E1
	   (PRO70)   (GLY81) H2
	   (GLU84)   (ASN90) E3
	  (GLY100)  (LYS106) H4
	  (LYS109)  (SER113) E5
	  (ASN119)  (GLY129) H6
	  (GLU132)  (PRO137) E7
	  (PRO137)  (ALA150) H8
	  (PRO153)  (SER158) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2     -149.0°   H2                                                      
E3      -27.3° -168.3°   E3                                               
H4     -142.0°  -11.7° -156.6°   H4                                        
E5      -36.8° -165.0°   -9.5° -155.0°   E5                                 
H6     -146.2°   47.3° -127.6°   44.6° -119.3°   H6                          
E7      -43.0°  165.2°  -16.3° -159.2°   -9.1° -117.9°   E7                   
H8     -121.1°   79.4° -111.7°   90.7° -108.4°   85.4°   99.5°   H8            
E9       47.3° -122.1°   46.2° -110.4°   47.5°  -99.6°   56.1°  154.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1o9ld1 :    (ALA57)  (SER158)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d3cdkc_ :    (ASP21)  (ALA122)   [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d2nrcb2 :    (ALA18)  (SER119)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d2nrba2 :    (ALA18)  (SER119)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d1opea2 :    (ALA18)  (SER119)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d1o9la1 :    (ALA57)  (SER158)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d1m3ea1 :    (ALA18)  (SER119)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d1o9lc1 :    (ALA57)  (SER158)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d4kgba1 :    (ALA51)  (PRO152)   [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1ooyb2 :    (ALA18)  (SER119)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d1ooya2 :    (ALA18)  (SER119)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d3oxog1 :    (ALA18)  (SER119)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |automated matches |Pig (Sus scrofa) [TaxId: 9823]
 d3dlxa1 :    (ALA57)  (PRO158)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d3rrla_ :    (ASP19)  (PRO120)   [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Helicobacter pylori [TaxId: 210]
 d1k6db_ :    (MET19)  (PRO120)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Acetate:CoA transferase alpha |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.124