Tableau information
Concept source: d3dj4a1 amino acid (a.a.) range (ASP6)(ASP145)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP6) (LEU12) E1
(SER35) (ALA48) H2
(ARG51) (GLY57) E3
(HIS60) (GLY75) H4
(ARG76) (LEU82) E5
(GLY88) (PRO101) H6
(ASN107) (SER112) E7
(ALA120) (SER134) H8
(ALA136) (ASP145) E9
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 176.2° H2
E3 -16.0° 162.9° E3
H4 145.2° -36.1° 161.0° H4
E5 -48.8° 129.3° -33.7° 164.6° E5
H6 137.8° -45.8° 134.0° -51.8° 125.8° H6
E7 -18.9° 161.7° -34.8° 126.4° -67.3° 135.2° E7
H8 125.1° -52.2° 111.8° -86.2° 78.5° -82.0° 139.9° H8
E9 -47.5° 131.4° -62.0° 102.0° -87.4° 140.4° -32.4° 130.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2bo4b_ : (SER2) (PRO130) [view usage] : c.68.1.18 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |MGS-like |automated matches |Rhodothermus marinus [TaxId: 29549]
d3q7ub_ : (GLU7) (ASP140) [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d3d8va1 : (ASP6) (ASP145) [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2xwlb_ : (ALA2) (PRO127) [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 1772]
d1hv9a2 : (ASN4) (ASP134) [view usage] : c.68.1.5 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |UDP-glucose pyrophosphorylase |N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain |Escherichia coli [TaxId: 562]
d2xwnb_ : (GLU7) (ASP140) [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2v0ha1 : (ALA5) (ASP134) [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Haemophilus influenzae [TaxId: 727]
d2bo4a1 : (SER2) (PRO130) [view usage] : c.68.1.18 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |MGS-like |Mannosylglycerate synthase, MGS |Rhodothermus marinus [TaxId: 29549]
d2xwla_ : (ALA2) (ASP133) [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 1772]
d1vpab_ : (MET1) (ASP134) [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) |Thermotoga maritima [TaxId: 2336]
d1fwya2 : (MET6) (ASP134) [view usage] : c.68.1.5 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |UDP-glucose pyrophosphorylase |N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain |Escherichia coli [TaxId: 562]
d2qkxa1 : (ASP6) (ASP145) [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Mycobacterium tuberculosis
d3dj4a1 : (ASP6) (ASP145) [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2xwma_ : (ALA2) (PRO127) [view usage] : c.68.1.0 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1w55a1 : (GLU3) (ASP128) [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |IspD/IspF bifunctional enzyme, CDP-me synthase domain |Campylobacter jejuni [TaxId: 197]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.68