Tableau information
Concept source: d3nofb_ amino acid (a.a.) range (ALA8)(ASP110)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA8) (ASP14) E1
(PHE17) (SER23) H2
(PRO27) (TRP33) E3
(PRO39) (ALA55) H4
(LEU58) (ASP64) E5
(GLU70) (GLN76) H6
(PRO81) (LYS87) E7
(LYS93) (GLY97) E8
(ALA102) (ASP110) H9
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -121.4° H2
E3 -69.5° -135.9° E3
H4 115.3° 56.0° -164.2° H4
E5 -48.6° -149.3° -23.1° -152.0° E5
H6 84.5° -41.9° -107.7° 87.9° -109.9° H6
E7 94.4° -59.0° 162.0° -22.3° 139.0° 77.5° E7
E8 -96.9° 120.4° -27.4° 144.1° -49.4° -111.7° 166.1° E8
H9 72.3° -64.8° 141.6° -47.2° 120.5° 64.6° -25.0° 168.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1x5ea_ : (ASN8) (LYS108) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4wxta_ : (ALA9) (SER110) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Mycobacterium avium [TaxId: 1160712]
d1bjxa_ : (ALA119) (HIS214) [view usage] : c.47.1.2 |Thioredoxin fold |Thioredoxin-like |PDI-like |Protein disulfide isomerase, PDI |Human (Homo sapiens) [TaxId: 9606]
d1ovnb2 : (GLY26) (ASN139) [view usage] : c.47.1.7 |Thioredoxin fold |Thioredoxin-like |ERP29 N domain-like |Windbeutel, N-terminal domain |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2diza_ : (THR8) (ALA113) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4poba_ : (ALA5) (ASP106) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d3trxa_ : (MET1) (LEU104) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Human (Homo sapiens) [TaxId: 9606]
d3us3a3 : (THR229) (GLU350) [view usage] : c.47.1.3 |Thioredoxin fold |Thioredoxin-like |Calsequestrin |Calsequestrin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d2dj2a_ : (VAL8) (SER113) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2dj1a_ : (GLY18) (SER123) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4ef0a_ : (MET26) (GLY140) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2jzta_ : (GLY18) (VAL124) [view usage] : c.47.1.20 |Thioredoxin fold |Thioredoxin-like |HyaE-like |Hydrogenase-1 operon protein HyaE |Salmonella typhimurium [TaxId: 90371]
d3nofb_ : (ALA8) (ASP110) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 419947]
d4pobb_ : (ALA5) (LEU105) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d3v1wa3 : (THR229) (GLU350) [view usage] : c.47.1.3 |Thioredoxin fold |Thioredoxin-like |Calsequestrin |Calsequestrin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.47