Protein Concepts Dictionary

Tableau information

Concept source:  d1xn1h_  amino acid (a.a.) range (SER12)(ALA154)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER12)   (ILE18) E1
	   (HIS23)   (THR42) H2
	   (SER45)   (PRO54) E3
	   (GLY55)   (GLY70) H4
	   (ALA74)   (ASP83) E5
	   (ASP90)  (THR107) H6
	  (VAL109)  (SER113) E7
	  (VAL115)  (HIS119) E8
	  (SER121)  (ALA154) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2      168.5°   H2                                                      
E3      -20.3°  167.1°   E3                                               
H4      158.7°  -28.4°  139.5°   H4                                        
E5      -16.8°  154.7°  -36.7° -174.6°   E5                                 
H6      157.4°  -27.6°  139.7°   -5.1° -170.7°   H6                          
E7      -43.2°  130.6°  -61.9°  158.1°  -26.7° -158.3°   E7                   
E8      -45.6°  123.7°  -65.5° -148.6°  -32.0° -144.5°  -27.3°   E8            
H9      143.3°  -37.2°  130.1°  -21.5°  153.8°  -16.9°  158.4°  134.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1xn1j_ :    (LYS10)  (GLN145)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Brucella abortus [TaxId: 235]
 d1t13b_ :    (PHE13)  (ALA155)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |automated matches |Brucella abortus [TaxId: 235]
 d2obxb_ :    (VAL12)  (ILE155)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |automated matches |Mesorhizobium loti [TaxId: 381]
 d1t13a_ :    (PHE13)  (GLN145)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |automated matches |Brucella abortus [TaxId: 235]
 d1t13d_ :    (PHE13)  (ALA154)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |automated matches |Brucella abortus [TaxId: 235]
 d1xn1h_ :    (SER12)  (ALA154)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Brucella abortus [TaxId: 235]
 d1xn1c_ :    (PHE13)  (ALA154)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Brucella abortus [TaxId: 235]
 d1xn1e_ :     (ASN9)  (GLN145)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Brucella abortus [TaxId: 235]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.16