Protein Concepts Dictionary

Tableau information

Concept source:  d3hhva_  amino acid (a.a.) range (PRO32)(LEU134)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO32)   (SER38) E1
	   (ASN40)   (THR46) H2
	   (ILE50)   (TRP56) E3
	   (ALA61)   (ASP76) H4
	   (ALA81)   (ASN86) E5
	   (ASP92)   (GLY98) H6
	  (PRO103)  (LYS109) E7
	  (VAL114)  (GLY119) E8
	  (ARG123)  (LEU134) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2     -130.8°   H2                                                      
E3      -68.1° -146.6°   E3                                               
H4      126.1°   41.5° -157.0°   H4                                        
E5      -50.0° -155.6°  -18.1° -162.9°   E5                                 
H6       85.2°  -56.2° -107.9°   92.3° -103.3°   H6                          
E7       95.6°  -49.6°  162.5°  -33.3°  145.0°   75.7°   E7                   
E8      -95.6°  121.9°  -28.1°  135.8°  -46.0° -106.2°  168.7°   E8            
H9       85.4°  -58.9°  152.3°  -42.4°  134.7°   76.6°  -10.4° -177.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3hz4b_ :     (SER5)  (HIS111)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Methanosarcina mazei [TaxId: 2209]
 d2o87a_ :     (VAL4)  (LEU104)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Staphylococcus aureus [TaxId: 1280]
 d2vm1d_ :     (VAL8)  (GLY114)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |automated matches |Hordeum vulgare [TaxId: 112509]
 d2h72a_ :     (LYS3)  (ALA108)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d1syra_ :     (MET9)  (ALA111)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d1syrb_ :    (VAL10)  (ALA111)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d2gzya_ :     (ALA2)  (LEU104)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |automated matches |Bacillus subtilis [TaxId: 1423]
 d2oe0a_ :     (ILE4)  (LEU104)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3hhva_ :    (PRO32)  (LEU134)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 2287]
 d1w4vc_ :     (THR1)  (ILE106)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4hu7b_ :     (ILE4)  (LEU107)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d2vm1b_ :     (ALA7)  (GLY114)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |automated matches |Hordeum vulgare [TaxId: 112509]
 d2o85a_ :     (ALA2)  (LEU104)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Staphylococcus aureus [TaxId: 1280]
 d1thxa_ :     (GLY3)  (ASN108)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Nostoc sp. PCC 7120 [TaxId: 103690]
 d1fb0b_ :    (GLN10)  (LYS110)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Spinach (Spinacia oleracea), thioredoxin M [TaxId: 3562]
 d2l4qa_ :     (ALA8)  (LEU108)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d2oe3b_ :     (ILE4)  (LEU104)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ovna2 :    (GLY26)  (ALA138)   [view usage] : c.47.1.7 |Thioredoxin fold |Thioredoxin-like |ERP29 N domain-like |Windbeutel, N-terminal domain |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d3hz4a_ :     (SER5)  (GLN110)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Methanosarcina mazei [TaxId: 2209]
 d2c1ya2 :    (GLY26)  (ASN139)   [view usage] : c.47.1.7 |Thioredoxin fold |Thioredoxin-like |ERP29 N domain-like |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d2h70a_ :     (LYS3)  (ALA108)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d2xbqa_ :     (SER2)  (PHE105)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
 d2o89a_ :     (ALA2)  (LEU104)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Staphylococcus aureus [TaxId: 1280]
 d1sjia2 :   (VAL127)  (HIS225)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Canis lupus [TaxId: 9615]
 d1w4vf_ :     (THR2)  (GLY107)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4i8ba_ :     (ASN3)  (LYS106)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Schistosoma japonicum [TaxId: 6182]
 d3dyra_ :     (LYS4)  (ALA110)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2pu9c_ :    (LYS16)  (SER121)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
 d2i4aa_ :     (GLU2)  (SER105)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |automated matches |Acetobacter aceti [TaxId: 435]
 d2c0fa2 :    (GLY26)  (ASN139)   [view usage] : c.47.1.7 |Thioredoxin fold |Thioredoxin-like |ERP29 N domain-like |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d2vm1c_ :     (ALA7)  (GLY114)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |automated matches |Hordeum vulgare [TaxId: 112509]
 d1x5da_ :     (ASP8)  (ASN119)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3pina_ :     (MET1)  (ASN103)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3uvtd_ :   (VAL324)  (ALA428)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2eira_ :     (LYS3)  (LEU107)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |automated matches |Escherichia coli [TaxId: 562]
 d3gixa_ :     (LEU5)  (ILE119)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2eiqa_ :     (LYS3)  (ASN106)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d3tcoa_ :    (VAL29)  (LEU132)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 2287]
 d2xbia_ :     (LYS3)  (LYS104)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
 d2c0fb2 :    (GLY26)  (ASN139)   [view usage] : c.47.1.7 |Thioredoxin fold |Thioredoxin-like |ERP29 N domain-like |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d2e0qa_ :    (VAL37)  (GLY139)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 111955]
 d4kndb_ :     (ASP5)  (ILE108)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Anaeromyxobacter dehalogenans [TaxId: 290397]
 d2qgva_ :    (GLY18)  (GLU125)   [view usage] : c.47.1.20 |Thioredoxin fold |Thioredoxin-like |HyaE-like |automated matches |Shigella flexneri [TaxId: 198214]
 d1w4vd_ :     (THR1)  (LEU105)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1t8eb_ :     (LYS3)  (LEU107)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d4tn8a_ :     (ILE5)  (LEU106)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
 d1a8ya2 :   (VAL127)  (HIS225)   [view usage] : c.47.1.3 |Thioredoxin fold |Thioredoxin-like |Calsequestrin |Calsequestrin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d2h75b_ :     (LYS3)  (ASN106)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
 d1ep8a_ :     (SER3)  (ALA112)   [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.47