Protein Concepts Dictionary

Tableau information

Concept source:  d2jk0h_  amino acid (a.a.) range (PRO218)(ALA326)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO218)  (TYR224) E1
	  (TYR232)  (GLY241) H2
	  (LYS243)  (GLY249) E3
	  (SER256)  (GLY270) H4
	  (GLY270)  (THR279) E5
	  (GLY282)  (ALA288) E6
	  (GLY292)  (SER297) E7
	  (PRO300)  (THR314) H8
	  (ASN316)  (ALA326) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2      173.1°   H2                                                      
E3      -19.8°  162.0°   E3                                               
H4     -170.4°  -15.2° -161.6°   H4                                        
E5      -39.2°  139.5°  -24.2°  148.0°   E5                                 
E6      103.4°  -80.3°  113.7°  -67.2°  137.5°   E6                          
E7      -79.4°  100.0°  -62.3°  108.0°  -40.2° -153.3°   E7                   
H8      151.8°  -33.0°  154.3°  -18.7°  159.5°  -48.6°  123.2°   H8            
H9      -68.0°  111.1°  -51.5°  119.5°  -28.8° -154.2°   11.5°  134.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1agxa_ :   (PRO216)  (ASN330)   [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase-asparaginase |Acinetobacter glutaminasificans [TaxId: 474]
 d1jsla_ :   (PRO218)  (THR326)   [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Asparaginase type II |Erwinia chrysanthemi [TaxId: 556]
 d1hfja_ :   (PRO218)  (THR326)   [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Asparaginase type II |Erwinia chrysanthemi [TaxId: 556]
 d1djoa_ :  (SER1219) (GLU1336)   [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase-asparaginase |Pseudomonas sp., 7A [TaxId: 306]
 d2jk0h_ :   (PRO218)  (ALA326)   [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |automated matches |Pectobacterium carotovorum [TaxId: 554]
 d1ho3a_ :   (PRO212)  (GLN325)   [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Asparaginase type II |Escherichia coli [TaxId: 562]
 d1hg0a_ :   (PRO218)  (THR326)   [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Asparaginase type II |Erwinia chrysanthemi [TaxId: 556]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.88