Protein Concepts Dictionary

Tableau information

Concept source:  d4fr8c_  amino acid (a.a.) range (PRO403)(VAL493)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO403)  (LYS409) E1
	  (THR412)  (ASN422) H2
	  (LEU427)  (THR433) E3
	  (ASP435)  (ALA445) H4
	  (GLY449)  (ASN454) E5
	  (ASP457)  (ALA461) E6
	  (GLN462)  (GLY467) E7
	  (GLY478)  (THR486) H8
	  (GLU487)  (VAL493) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2      143.2°   H2                                                      
E3      -53.6°  162.9°   E3                                               
H4      115.9°  -27.3°  168.5°   H4                                        
E5      -77.1°  138.5°  -24.5°  162.1°   E5                                 
E6      114.9°  -62.7°  118.2°  -69.0°  118.3°   E6                          
E7       77.5°  -77.0°  110.8°   59.5° -115.4° -126.2°   E7                   
H8      115.3°  -28.7°  168.2°   -8.9° -167.2°  -60.6°   66.9°   H8            
E9      -77.8°  -88.8°  101.1°  -79.3°  116.9°   37.6° -114.0°   70.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1wnba_ :   (PRO382)  (LYS473)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Putative betaine aldehyde dehydrogenase YdcW |Escherichia coli [TaxId: 562]
 d3n81a_ :   (PRO403)  (VAL493)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d4i8pb_ :   (PRO399)  (GLU489)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Maize (Zea mays) [TaxId: 4577]
 d1nzwa_ :   (PRO403)  (VAL493)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d4fr8g_ :   (PRO403)  (VAL493)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d4a0ma_ :   (PRO394)  (ASP485)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
 d1bxsa_ :   (PRO403)  (ILE493)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Sheep (Ovis aries) [TaxId: 9940]
 d4fr8a_ :   (PRO403)  (VAL493)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d2onna_ :   (PRO403)  (VAL493)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d1cw3a_ :   (PRO403)  (VAL493)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d3r31a_ :   (PRO396)  (GLY489)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d4fqfb_ :   (PRO403)  (VAL493)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d2xdra_ :   (PRO391)  (GLY484)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4wj9a_ :   (PRO404)  (VAL494)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4i8qa_ :   (PRO398)  (SER491)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Solanum lycopersicum [TaxId: 4081]
 d4neab_ :   (PRO394)  (ASN487)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d4dalg_ :   (PRO382)  (ASN473)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4fqfa_ :   (PRO403)  (VAL493)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d4nu9b_ :   (PRO394)  (ASN487)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d4qjeb_ :   (PRO394)  (ASN487)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d4qn2a_ :   (PRO394)  (ASN487)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d3inla_ :   (PRO403)  (VAL493)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d4i9ba_ :   (PRO398)  (SER491)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Solanum lycopersicum [TaxId: 4081]
 d3zqaa_ :   (PRO391)  (GLY484)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4neaa1 :   (PRO394)  (ASN487)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d4fr8c_ :   (PRO403)  (VAL493)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d4i8pa_ :   (PRO399)  (GLU489)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Maize (Zea mays) [TaxId: 4577]
 d4wb9a_ :   (PRO404)  (VAL494)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4dala_ :   (PRO382)  (ASN473)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4nu9a_ :   (PRO394)  (ASN487)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d4qn2b_ :   (PRO394)  (ASN487)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.82