Protein Concepts Dictionary

Tableau information

Concept source:  d3i3sr_  amino acid (a.a.) range (MET1)(GLY115)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEEHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET1)   (ALA11) E1
	   (GLY15)   (ASN26) H2
	   (ILE36)   (LYS42) E3
	   (LEU52)   (THR58) E4
	   (MET67)   (ARG73) H5
	   (GLY77)   (ALA83) E6
	   (THR87)   (ILE93) H7
	   (HIS94)  (ASP105) H8
	  (PRO110)  (GLY115) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2      149.9°   H2                                                      
E3      148.5°   23.0°   E3                                               
E4      -17.2° -156.7°  165.5°   E4                                        
H5     -156.9°   33.6°  -17.1° -169.1°   H5                                 
E6      -30.0°  120.3°  121.3°  -44.5°  135.9°   E6                          
H7      122.3°  -87.7°  -79.9°  111.9°  -62.9° -150.1°   H7                   
H8      138.7°  -68.5°  -72.2°  122.3°  -58.9°  164.4°  -31.5°   H8            
E9      -42.0°  108.1°  111.2°  -55.2°  127.1°  -12.4° -162.0°  163.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1wf3a1 :     (GLU3)  (GLY124)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |GTPase Era, N-terminal domain |Thermus thermophilus [TaxId: 274]
 d4qxaa_ :     (SER6)  (GLY123)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab9a |Mouse (Mus musculus) [TaxId: 10090]
 d2hv8a_ :     (ASP9)  (GLY123)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2oila_ :    (ASN10)  (GLY124)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2rgda_ :     (MET1)  (GLY115)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |cH-p21 Ras protein |Human (Homo sapiens) [TaxId: 9606]
 d3c5cb_ :    (VAL21)  (GLY133)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3i3sr_ :     (MET1)  (GLY115)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |cH-p21 Ras protein |Human (Homo sapiens) [TaxId: 9606]
 d1z22a1 :     (VAL8)  (GLN120)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab23 |Mouse (Mus musculus) [TaxId: 10090]
 d2gf0b_ :     (GLU3)  (GLY120)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |di-Ras1 |Human (Homo sapiens) [TaxId: 9606]
 d1an0a_ :     (GLN2)  (GLN116)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37