Protein Concepts Dictionary

Tableau information

Concept source:  d2fg5a1  amino acid (a.a.) range (ILE3)(LEU122)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ILE3)   (ASP13) E1
	   (GLY17)   (ASP28) H2
	   (GLY39)   (PRO48) E3
	   (GLU52)   (GLN64) E4
	   (PHE67)   (ARG76) H5
	   (ALA80)   (ASP86) E6
	   (GLN90)  (GLY107) H7
	  (VAL112)  (GLY117) E8
	  (GLY117)  (LEU122) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2      149.6°   H2                                                      
E3      137.4°   37.3°   E3                                               
E4      -22.7° -149.8°  159.8°   E4                                        
H5     -158.0°   40.4°  -28.6° -167.8°   H5                                 
E6      -30.4°  119.5°  115.0°  -46.0°  143.4°   E6                          
H7      131.8°  -78.1°  -80.6°  117.2°  -52.1°  162.2°   H7                   
E8      -43.5°  106.1°  106.9°  -55.9°  135.2°  -13.8°  172.0°   E8            
H9      -65.2°   84.5°   88.0°  -76.8°  114.9°  -34.9°  162.2°   21.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1wa5a_ :     (GLN8)  (LYS127)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Dog (Canis familiaris) [TaxId: 9615]
 d4v0kb_ :    (ASN19)  (LEU132)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d1n6ha_ :    (ASN16)  (LEU137)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab5a |Human (Homo sapiens) [TaxId: 9606]
 d1huqa_ :    (ILE19)  (LEU138)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab5c |Mouse (Mus musculus) [TaxId: 10090]
 d4v0lb_ :    (SER15)  (PRO133)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d3wyga_ :    (VAL10)  (LYS129)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Saccharomyces cerevisiae [TaxId: 764097]
 d4v0la_ :    (ALA14)  (LEU132)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d3mjha_ :    (LYS17)  (ARG141)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab5a |Human (Homo sapiens) [TaxId: 9606]
 d3mjhc_ :    (LYS17)  (LEU137)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab5a |Human (Homo sapiens) [TaxId: 9606]
 d3nbzc_ :     (GLN8)  (LYS127)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2x19a_ :     (GLU9)  (LYS129)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ibra_ :    (LYS12)  (LYS127)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Human (Homo sapiens) [TaxId: 9606]
 d2bkua_ :    (LYS12)  (LYS127)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Dog (Canis familiaris) [TaxId: 9615]
 d3w3zb_ :     (GLN8)  (LYS127)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Dog (Canis familiaris) [TaxId: 9615]
 d1tu3e_ :    (ASN16)  (LEU137)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab5a |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37