Protein Concepts Dictionary

Tableau information

Concept source:  d2wo8b_  amino acid (a.a.) range (ILE114)(TYR262)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEEEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ILE114)  (ILE118) E1
	  (ASN126)  (THR145) H2
	  (PRO146)  (LYS151) E3
	  (ASP158)  (PHE163) E4
	  (LEU181)  (PHE185) E5
	  (SER189)  (ASP194) H6
	  (ASP194)  (ASP198) E7
	  (PHE213)  (GLY225) H8
	  (SER251)  (TYR262) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2      161.3°   H2                                                      
E3      -29.4°  166.6°   E3                                               
E4      -23.8°  138.7°  -53.1°   E4                                        
E5      141.6°  -51.6°  115.1°  160.5°   E5                                 
H6      -68.4°  101.5°  -91.7°  -49.5° -149.4°   H6                          
E7      -29.8°  132.8°  -59.1°   -6.0°  163.3°  -45.2°   E7                   
H8      137.5°  -47.3°  119.9°  145.0°  -21.2°  147.5°  144.8°   H8            
H9      123.2°  -70.3°   96.4°  144.7°   18.7° -163.9°  149.7°   31.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1y93a_ :   (ILE114)  (TYR262)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
 d3v96b_ :   (VAL118)  (TYR262)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1usna_ :    (LEU97)  (GLY247)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-1 (MMP-3) |Human (Homo sapiens), fibroblast [TaxId: 9606]
 d1fbla2 :   (LEU114)  (TYR260)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Fibroblast collagenase (MMP-1) |Pig (Sus scrofa) [TaxId: 9823]
 d1slma2 :   (VAL102)  (TYR246)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-1 (MMP-3) |Human (Homo sapiens), fibroblast [TaxId: 9606]
 d2wo8b_ :   (ILE114)  (TYR262)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
 d1jana_ :    (LEU93)  (GLY242)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Neutrophil collagenase (MMP-8) |Human (Homo sapiens) [TaxId: 9606]
 d2z2da_ :   (ILE114)  (LEU261)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
 d1hova_ :    (ILE16)  (ALA139)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |MMP-2 |Human (Homo sapiens) [TaxId: 9606]
 d2wo8d_ :   (ILE114)  (TYR262)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
 d2jsda_ :   (SER127)  (GLY271)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2wo9b_ :   (ASN119)  (TYR262)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
 d1ueaa_ :    (LEU97)  (TYR246)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-1 (MMP-3) |Human (Homo sapiens), fibroblast [TaxId: 9606]
 d2ddya_ :    (VAL20)  (ILE160)   [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j0tc_ :   (LEU114)  (TYR260)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Fibroblast collagenase (MMP-1) |Human (Homo sapiens) [TaxId: 9606]
 d1rm8a_ :   (ILE132)  (TYR290)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Matrix metalloproteinase-16 (MMP-16) |Human (Homo sapiens) [TaxId: 9606]
 d1ayka_ :    (THR12)  (TYR160)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Fibroblast collagenase (MMP-1) |Human (Homo sapiens) [TaxId: 9606]
 d2j0tb_ :   (LEU114)  (TYR260)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Fibroblast collagenase (MMP-1) |Human (Homo sapiens) [TaxId: 9606]
 d1cgea_ :   (LEU114)  (TYR260)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Fibroblast collagenase (MMP-1) |Human (Homo sapiens) [TaxId: 9606]
 d1flsa_ :    (LEU15)  (TYR163)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Collagenase-3 (MMP-13) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.92