Protein Concepts Dictionary

Tableau information

Concept source:  d1q3ab_  amino acid (a.a.) range (LEU113)(GLY224)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU113)  (ASN119) E1
	  (PRO125)  (THR144) H2
	  (PRO145)  (ARG150) E3
	  (ASP157)  (LYS165) E4
	  (ASN170)  (GLY175) E5
	  (LEU180)  (TYR184) E6
	  (PRO188)  (ASP193) H7
	  (ASP193)  (ASP199) E8
	  (ASN210)  (GLY224) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
H2      159.3°   H2                                                      
E3      -34.1°  162.2°   E3                                               
E4      -26.0°  133.3°  -58.0°   E4                                        
E5      -51.1°  122.5°  -75.0°  -52.4°   E5                                 
E6      140.6°  -51.6°  110.7°  144.0° -163.5°   E6                          
H7      -68.2°  103.1°  -94.6°  -62.1°   19.7° -151.0°   H7                   
E8      -26.0°  137.4°  -59.0°  -21.2°  -31.6°  164.1°  -44.5°   E8            
H9      135.9°  -45.3°  117.9°  126.4°  165.2°  -23.1°  146.2°  147.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4dpeb_ :    (LEU97)  (GLY208)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-1 (MMP-3) |Human (Homo sapiens), fibroblast [TaxId: 9606]
 d1c8ta_ :    (LEU97)  (GLY208)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-1 (MMP-3) |Human (Homo sapiens), fibroblast [TaxId: 9606]
 d1rosa_ :   (ILE114)  (GLY225)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
 d2d1oa_ :    (LEU97)  (GLY208)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-1 (MMP-3) |Human (Homo sapiens), fibroblast [TaxId: 9606]
 d1l6ja2 :   (ASN120)  (GLY408)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Gelatinase B (MMP-9) |Human (Homo sapiens) [TaxId: 9606]
 d1c3ia_ :    (LEU97)  (GLY208)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-1 (MMP-3) |Human (Homo sapiens), fibroblast [TaxId: 9606]
 d1q3ab_ :   (LEU113)  (GLY224)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-2 (MMP-10) |Human (Homo sapiens) [TaxId: 9606]
 d1cgla_ :   (LEU114)  (GLY225)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Fibroblast collagenase (MMP-1) |Human (Homo sapiens) [TaxId: 9606]
 d1qiba_ :    (GLN96)  (GLY208)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Gelatinase A |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.92