Tableau information
Concept source: d4kdea2 amino acid (a.a.) range (ARG179)(GLY325)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: EEHHHHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG179) (GLY185) E1
(MET191) (LEU195) E2
(ASP210) (GLU215) H3
(PHE218) (GLN224) H4
(GLN224) (GLY234) H5
(ALA238) (GLY255) H6
(VAL284) (ASP288) E7
(GLY289) (VAL293) E8
(GLU301) (GLY325) H9
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 152.2° E2
H3 -43.0° 164.7° H3
H4 -68.1° 139.4° -25.4° H4
H5 -94.5° 107.7° 61.9° -50.7° H5
H6 -106.9° 67.2° -112.0° -104.5° 137.9° H6
E7 108.6° -92.8° 74.3° 52.2° -77.0° -62.1° E7
E8 -76.9° 77.0° -117.9° -142.9° 123.7° 96.6° 158.7° E8
H9 42.4° -160.1° 14.4° -28.7° 74.0° -97.9° 68.0° -119.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1bmda2 : (ARG178) (GLY330) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Thermus flavus [TaxId: 274]
d4kdfa2 : (ARG179) (GLY325) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Thermus thermophilus [TaxId: 274]
d7mdhb2 : (SER221) (VAL366) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
d1bdma2 : (ARG178) (GLY330) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Thermus flavus [TaxId: 274]
d4kdeb2 : (ARG179) (GLY325) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Thermus thermophilus [TaxId: 274]
d4kdea2 : (ARG179) (GLY325) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Thermus thermophilus [TaxId: 274]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.162