Tableau information
Concept source: d2casa_ amino acid (a.a.) range (HIS102)(GLN213)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: EEHHEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(HIS102) (PRO108) E1
(PRO108) (ALA114) E2
(ALA116) (PHE121) H3
(ASN122) (MET133) H4
(SER134) (ILE145) E5
(ASN147) (ALA157) E6
(PRO161) (ASN167) E7
(LEU173) (SER179) E8
(PRO202) (GLN213) E9
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 95.8° E2
H3 39.4° -56.9° H3
H4 123.9° 49.9° 96.8° H4
E5 45.4° 140.9° 84.1° 147.6° E5
E6 -89.5° 133.7° 110.9° -146.6° -57.4° E6
E7 72.4° -65.1° -64.2° 54.0° 99.0° 156.3° E7
E8 130.7° -62.1° -108.3° -12.5° -141.4° 138.4° -58.4° E8
E9 134.2° 114.9° -154.1° -66.4° -99.8° -92.2° 89.9° 53.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1vu0a_ : (PHE274) (LEU381) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |automated matches |Adeno-associated virus - 6 [TaxId: 68558]
d2casa_ : (HIS102) (GLN213) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |Parvovirus (panleukopenia virus) capsid protein |Canine parvovirus [TaxId: 10788]
d3shma_ : (PHE274) (LEU381) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |automated matches |Adeno-associated virus - 6 [TaxId: 68558]
d1c8fa_ : (HIS102) (PRO205) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |Parvovirus (panleukopenia virus) capsid protein |Feline parvovirus [TaxId: 10785]
d1c8da_ : (HIS102) (GLN213) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |Parvovirus (panleukopenia virus) capsid protein |Canine parvovirus [TaxId: 10788]
d3ng9a_ : (PHE274) (LEU381) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |automated matches |Adeno-associated virus - 1 [TaxId: 85106]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.121