Tableau information
Concept source: d4ik0a2 amino acid (a.a.) range (GLN146)(ALA268)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: EEHEEHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN146) (GLY156) E1
(PRO158) (GLN163) E2
(VAL172) (PRO186) H3
(GLU187) (LYS198) E4
(ILE202) (GLU208) E5
(CYS217) (GLY232) H6
(GLU236) (LEU242) E7
(GLY245) (TRP251) E8
(LEU258) (ALA268) E9
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 136.3° E2
H3 -63.3° 135.4° H3
E4 108.4° -28.0° 131.1° E4
E5 -81.2° 140.7° -63.4° 164.9° E5
H6 113.8° -57.3° 78.4° -60.7° 127.0° H6
E7 -107.7° 92.7° -121.7° 107.0° -58.2° 138.5° E7
E8 75.1° -100.1° 38.8° -92.5° 101.4° -44.4° 157.7° E8
E9 -77.2° 100.3° -124.3° 96.8° -73.5° 156.7° -37.7° 152.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1s7ja_ : (TYR3) (ARG122) [view usage] : d.21.1.2 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PhzC/PhzF-like |Hypothetical protein EF0119 |Enterococcus faecalis [TaxId: 1351]
d3ejxa2 : (SER178) (PHE305) [view usage] : d.21.1.1 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |Diaminopimelate epimerase |Diaminopimelate epimerase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1qyab1 : (LYS2) (GLU119) [view usage] : d.21.1.2 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PhzC/PhzF-like |Hypothetical protein YddE |Escherichia coli [TaxId: 562]
d1sdja1 : (LYS2) (THR122) [view usage] : d.21.1.2 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PhzC/PhzF-like |Hypothetical protein YddE |Escherichia coli [TaxId: 562]
d1bwza2 : (LEU149) (GLY262) [view usage] : d.21.1.1 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |Diaminopimelate epimerase |Diaminopimelate epimerase |Haemophilus influenzae [TaxId: 727]
d3ejxb2 : (SER178) (PHE305) [view usage] : d.21.1.1 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |Diaminopimelate epimerase |Diaminopimelate epimerase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4ik0a2 : (GLN146) (ALA268) [view usage] : d.21.1.1 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |Diaminopimelate epimerase |Diaminopimelate epimerase |Escherichia coli K-12 [TaxId: 83333]
d4ijzb2 : (GLU145) (TYR268) [view usage] : d.21.1.1 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |Diaminopimelate epimerase |Diaminopimelate epimerase |Escherichia coli K-12 [TaxId: 83333]
d1t6ka1 : (ASN3) (ASP118) [view usage] : d.21.1.2 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PhzC/PhzF-like |Phenazine biosynthesis protein PhzF |Pseudomonas fluorescens [TaxId: 294]
d2q9ja2 : (THR147) (TYR268) [view usage] : d.21.1.1 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |Diaminopimelate epimerase |Diaminopimelate epimerase |Haemophilus influenzae [TaxId: 727]
d4ik0b2 : (GLN146) (ALA268) [view usage] : d.21.1.1 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |Diaminopimelate epimerase |Diaminopimelate epimerase |Escherichia coli K-12 [TaxId: 83333]
d4ijza2 : (GLN146) (TYR268) [view usage] : d.21.1.1 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |Diaminopimelate epimerase |Diaminopimelate epimerase |Escherichia coli K-12 [TaxId: 83333]
d1xuba1 : (HIS2) (ASP118) [view usage] : d.21.1.2 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PhzC/PhzF-like |Phenazine biosynthesis protein PhzF |Pseudomonas fluorescens [TaxId: 294]
d4juub_ : (GLY151) (ILE292) [view usage] : d.21.1.0 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 190485]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.21