Protein Concepts Dictionary

Tableau information

Concept source:  d1bq1a_  amino acid (a.a.) range (ALA148)(PRO256)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA148)  (VAL154) E1
	  (LYS158)  (TYR164) E2
	  (ASP169)  (CYS192) H3
	  (ASP198)  (GLY204) E4
	  (GLY204)  (TYR209) E5
	  (MET213)  (SER221) H6
	  (LYS229)  (ARG234) E7
	  (ASP246)  (GLY251) E8
	  (GLY251)  (PRO256) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2      161.6°   E2                                                      
H3      -37.2°  147.9°   H3                                               
E4      154.0°   -8.5°  143.0°   E4                                        
E5     -124.2°   65.7° -136.3°   73.7°   E5                                 
H6      -25.1° -151.9°   58.6° -151.6° -100.1°   H6                          
E7      -82.2°  108.4°  -45.4°  108.2°  115.6°   99.5°   E7                   
E8       86.3°  -85.8°  123.5°  -87.0°  -62.5°   66.1°  163.8°   E8            
E9      155.3°  -18.7° -166.2°  -24.9°  -50.1°  135.2° -122.5°   69.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1f4ca_ :   (ALA148)  (PRO256)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d3hj3d2 :   (VAL404)  (TYR512)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Cryptosporidium hominis [TaxId: 237895]
 d1bo7a_ :   (LEU201)  (PRO308)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
 d1kzja_ :   (ALA148)  (PRO256)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d1jmia_ :   (LEU201)  (TYR307)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
 d2g8da_ :   (LEU201)  (PRO308)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
 d1vzba_ :   (LEU201)  (PRO308)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
 d1ffla_ :   (ALA148)  (HIS255)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d3kjrb2 :   (CYS395)  (HIS502)   [view usage] : d.117.1.0 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |automated matches |Babesia bovis [TaxId: 484906]
 d4fogd_ :   (ALA148)  (HIS254)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d1bq1a_ :   (ALA148)  (PRO256)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.117