Tableau information
Concept source: d2ix2b1 amino acid (a.a.) range (GLY33)(PRO112)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: EEHEEHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY33) (ILE39) E1
(PHE46) (PRO52) E2
(PRO52) (GLU57) H3
(GLU57) (GLN63) E4
(GLU64) (GLY69) E5
(LYS71) (LYS80) H6
(THR87) (ASN93) E7
(LEU97) (GLY103) E8
(THR106) (PRO112) E9
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 174.9° E2
H3 111.9° -63.0° H3
E4 78.0° -105.3° 128.0° E4
E5 -39.4° 135.5° 72.6° 98.9° E5
H6 -125.4° 50.0° 29.0° 147.9° 91.5° H6
E7 81.1° -102.0° -124.9° 3.8° 100.2° 144.1° E7
E8 -116.1° 60.2° 40.9° 163.7° -88.7° -16.2° 159.9° E8
E9 51.6° -132.5° -142.4° -29.2° 82.5° 171.3° -32.9° 166.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ud9a1 : (GLY33) (GLU115) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |Proliferating cell nuclear antigen (PCNA) |Sulfolobus tokodaii [TaxId: 111955]
d2ix2b1 : (GLY33) (PRO112) [view usage] : d.131.1.0 |DNA clamp |DNA clamp |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d1rwza1 : (GLY33) (ALA109) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |Proliferating cell nuclear antigen (PCNA) |Archaeoglobus fulgidus [TaxId: 2234]
d2izob1 : (GLY34) (GLU111) [view usage] : d.131.1.0 |DNA clamp |DNA clamp |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d3k4xa1 : (GLY34) (LYS117) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |Proliferating cell nuclear antigen (PCNA) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2io4b1 : (GLY34) (GLU111) [view usage] : d.131.1.0 |DNA clamp |DNA clamp |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d2ijxa1 : (SER33) (ARG112) [view usage] : d.131.1.0 |DNA clamp |DNA clamp |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d1axce1 : (GLY34) (ASP120) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |Proliferating cell nuclear antigen (PCNA) |Human (Homo sapiens) [TaxId: 9606]
d4l6pa1 : (GLY34) (LYS117) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d3gpna1 : (GLY34) (ASP120) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3a2fb2 : (ILE165) (ALA244) [view usage] : d.131.1.2 |DNA clamp |DNA clamp |DNA polymerase processivity factor |automated matches |Pyrococcus furiosus [TaxId: 2261]
d2hiic1 : (VAL34) (VAL111) [view usage] : d.131.1.0 |DNA clamp |DNA clamp |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d2ix2c1 : (VAL49) (SER132) [view usage] : d.131.1.0 |DNA clamp |DNA clamp |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d2hiib1 : (GLY34) (PRO113) [view usage] : d.131.1.0 |DNA clamp |DNA clamp |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 2287]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.131