Protein Concepts Dictionary

Tableau information

Concept source:  d1tuua2  amino acid (a.a.) range (ILE204)(ALA330)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEHHHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ILE204)  (GLY210) E1
	  (ASN211)  (ALA217) E2
	  (VAL224)  (MET228) E3
	  (ASP246)  (LYS256) H4
	  (THR260)  (SER272) H5
	  (GLY273)  (GLY279) H6
	  (ASP283)  (GLY294) H7
	  (ARG296)  (ASN321) H8
	  (ASN321)  (ALA330) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2      173.6°   E2                                                      
E3      -17.8°  158.5°   E3                                               
H4       22.1° -151.6°   16.6°   H4                                        
H5     -101.2°   85.1°  106.4°  121.4°   H5                                 
H6      -54.0°  127.0°   41.1°   55.9°   81.1°   H6                          
H7       84.5°  -97.6°   72.6°   87.1°  -63.3°   31.6°   H7                   
H8      156.6°  -20.6°  158.9° -143.2°  -94.7°  146.8° -118.2°   H8            
E9      -22.9°  161.0°  -40.3°  -43.1°  -87.8°  -68.8°  -94.8°  144.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1x3ma1 :   (LEU199)  (THR324)   [view usage] : c.55.1.2 |Ribonuclease H-like motif |Actin-like ATPase domain |Acetokinase-like |Propionate kinase |Salmonella typhimurium [TaxId: 90371]
 d1tuua2 :   (ILE204)  (ALA330)   [view usage] : c.55.1.2 |Ribonuclease H-like motif |Actin-like ATPase domain |Acetokinase-like |Acetate kinase |Methanosarcina thermophila [TaxId: 2210]
 d4h0pa2 :   (VAL217)  (GLY360)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Cryptococcus neoformans [TaxId: 5207]
 d3slca2 :   (ILE207)  (GLY332)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Salmonella enterica [TaxId: 90371]
 d1g99a2 :   (ILE204)  (THR329)   [view usage] : c.55.1.2 |Ribonuclease H-like motif |Actin-like ATPase domain |Acetokinase-like |Acetate kinase |Methanosarcina thermophila [TaxId: 2210]
 d4ijna2 :   (GLN185)  (THR309)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55