Protein Concepts Dictionary

Tableau information

Concept source:  d1xesd2  amino acid (a.a.) range (VAL243)(GLY338)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEHHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL243)  (VAL249) E1
	  (ALA256)  (ARG262) E2
	  (GLY265)  (LYS271) E3
	  (LYS271)  (GLU288) H4
	  (ASP297)  (PHE302) H5
	  (PHE302)  (HIS306) E6
	  (GLY309)  (ASN321) H7
	  (ASP323)  (ILE328) H8
	  (ILE328)  (GLY338) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2      -79.0°   E2                                                      
E3       86.6°  165.6°   E3                                               
H4      139.4° -116.9°   73.4°   H4                                        
H5     -116.9°   41.4° -152.0°   94.4°   H5                                 
E6      -36.3°   43.0° -122.8°  146.2°   81.2°   E6                          
H7      112.7° -152.8°   35.2°  -38.5° -129.8°  145.5°   H7                   
H8      -90.4°  -11.4°  175.9°  107.2°   32.0°  -54.5°  145.0°   H8            
H9      -63.0°   30.6° -140.5°  146.0°   54.8°  -31.3° -175.3°  -39.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3a5qa2 :   (ILE229)  (GLY328)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Rheum palmatum [TaxId: 137221]
 d3wd7a2 :   (LEU236)  (GLY335)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Citrus microcarpa [TaxId: 164113]
 d1xesd2 :   (VAL243)  (GLY338)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Scots pine (Pinus sylvestris) [TaxId: 3349]
 d1u0ua2 :   (VAL243)  (CYS344)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Dihydropinosylvin synthase |Scots pine (Pinus sylvestris) [TaxId: 3349]
 d1u0va2 :   (VAL240)  (GLY335)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Chalcone synthase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d3ov2c2 :   (ALA240)  (GLY335)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Curcuma longa [TaxId: 136217]
 d1z1ea2 :   (LEU236)  (CYS341)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Peanut (Arachis hypogaea) [TaxId: 3818]
 d1xesa2 :   (VAL243)  (GLY338)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Scots pine (Pinus sylvestris) [TaxId: 3349]
 d4wuma2 :   (ILE236)  (GLY335)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Freesia hybrid [TaxId: 867926]
 d1xpka2 :   (ASP174)  (GLU290)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |3-hydroxy-3-methylglutaryl CoA synthase MvaS |Staphylococcus aureus [TaxId: 1280]
 d3sqza2 :   (THR175)  (ILE274)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
 d3il3a2 :   (THR177)  (GLY290)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Haemophilus influenzae [TaxId: 727]
 d1x9ea2 :   (ASP174)  (VAL273)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |3-hydroxy-3-methylglutaryl CoA synthase MvaS |Enterococcus faecalis [TaxId: 1351]
 d3a5qb2 :   (ILE229)  (LYS325)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Rheum palmatum [TaxId: 137221]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.95