Protein Concepts Dictionary

Tableau information

Concept source:  d2pk0a_  amino acid (a.a.) range (TYR0)(THR133)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEHHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (TYR0)    (ILE9) E1
	   (GLN17)   (LYS26) E2
	   (VAL29)   (GLY39) E3
	   (ARG42)   (THR62) H4
	   (SER68)   (SER91) H5
	   (LYS95)  (ILE106) E6
	  (ASP109)  (GLY117) E7
	  (ARG120)  (ARG125) E8
	  (GLU128)  (THR133) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2     -155.4°   E2                                                      
E3       14.7°  160.0°   E3                                               
H4     -160.1°   -4.8°  163.3°   H4                                        
H5      -13.8°  141.6°  -25.7°  146.3°   H5                                 
E6      163.4°  -37.1°  161.5°  -32.9°  165.4°   E6                          
E7      -22.1°  144.9°  -15.2°  148.1°  -25.0° -169.0°   E7                   
E8      138.8°  -62.5°  136.9°  -58.4°  148.2°  -25.6° -150.6°   E8            
E9      -68.7°   92.4°  -67.6°   95.9°  -59.8°  127.6°  -52.5°  152.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2pk0c_ :     (TYR0)  (THR133)   [view usage] : d.219.1.0 |PP2C-like |PP2C-like |automated matches |automated matches |Streptococcus agalactiae [TaxId: 205921]
 d2pk0a_ :     (TYR0)  (THR133)   [view usage] : d.219.1.0 |PP2C-like |PP2C-like |automated matches |automated matches |Streptococcus agalactiae [TaxId: 205921]
 d2jfra_ :     (ALA7)  (THR126)   [view usage] : d.219.1.0 |PP2C-like |PP2C-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d2jfsa_ :     (LEU5)  (THR126)   [view usage] : d.219.1.0 |PP2C-like |PP2C-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d2pk0d_ :     (GLU2)  (THR133)   [view usage] : d.219.1.0 |PP2C-like |PP2C-like |automated matches |automated matches |Streptococcus agalactiae [TaxId: 205921]
 d1txob_ :     (THR5)  (THR133)   [view usage] : d.219.1.1 |PP2C-like |PP2C-like |PP2C-like |putative serine/threonine phosphatase pstp/ppp |Mycobacterium tuberculosis [TaxId: 1773]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.219