Protein Concepts Dictionary

Tableau information

Concept source:  d1nqta2  amino acid (a.a.) range (ASN56)(THR186)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN56)   (ARG66) E1
	   (SER71)   (SER83) E2
	   (THR87)   (SER96) E3
	  (SER100)  (VAL118) H4
	  (GLY123)  (VAL129) E5
	  (ASN132)  (THR137) H6
	  (THR137)  (GLY156) H7
	  (ASP163)  (PRO167) E8
	  (GLU175)  (THR186) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2      163.4°   E2                                                      
E3      -44.4°  143.1°   E3                                               
H4      125.4°  -38.1°  136.6°   H4                                        
E5      -27.8°  165.7°  -24.1°  148.6°   E5                                 
H6       30.7° -137.7°  -75.1° -105.5°   56.3°   H6                          
H7      138.9°  -46.3°  149.9°  -70.8°  138.1°  114.3°   H7                   
E8      -58.4°  118.2°  -35.0°  101.6°  -54.3°  -82.7°  162.5°   E8            
H9       92.5°  -87.2°  127.9°  -88.6°  104.1°   67.2°  -47.5°  149.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1hwya2 :    (ASN56)  (HIS189)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]
 d2yfqb1 :    (GLN36)  (ASN165)   [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Peptoniphilus asaccharolyticus [TaxId: 1258]
 d2yfqa1 :    (GLN36)  (LEU164)   [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Peptoniphilus asaccharolyticus [TaxId: 1258]
 d3etda1 :    (ASN56)  (HIS189)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d1nqta2 :    (ASN56)  (THR186)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]
 d1b26a2 :    (LYS34)  (GLY164)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Thermotoga maritima [TaxId: 2336]
 d3etea1 :    (PHE63)  (HIS189)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d1l1fa2 :    (ASN60)  (HIS193)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
 d3mvqa1 :    (PHE63)  (THR186)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]
 d1euzf2 :    (MET35)  (ARG165)   [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Thermococcus profundus [TaxId: 49899]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.58