Protein Concepts Dictionary

Tableau information

Concept source:  d2ey6a_  amino acid (a.a.) range (LEU7)(VAL114)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU7)   (THR13) E1
	   (THR33)   (LEU38) E2
	   (LEU38)   (PRO42) E3
	   (TYR54)   (ALA69) H4
	   (LYS71)   (ASP77) E5
	   (GLY86)   (TYR91) E6
	   (TYR91)   (ASP95) E7
	   (VAL99)  (GLY107) H8
	  (LEU108)  (VAL114) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2     -144.1°   E2                                                      
E3      -43.5°  106.0°   E3                                               
H4      -83.8°  110.9° -123.4°   H4                                        
E5      141.0°   63.0° -118.7°  115.8°   E5                                 
E6     -117.0°  -42.2°  105.2°   77.9°  100.6°   E6                          
E7      -60.6° -100.9°   78.7°   53.6°  158.2°   60.1°   E7                   
H8      -95.8°  -52.3°   53.9°  142.4°  -87.8°  -68.8°   93.5°   H8            
E9      131.0°  -83.2°  137.0°  -89.4°  -29.4° -108.7° -142.0° -117.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1snma_ :     (LEU7)  (LYS116)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1kaaa_ :     (LYS6)  (VAL114)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d2eypa_ :     (LYS6)  (VAL114)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1tqoa_ :     (LEU7)  (VAL114)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1kdaa_ :     (LYS6)  (VAL114)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d2f0ja_ :     (LEU7)  (VAL114)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1ey7a_ :     (LEU7)  (VAL114)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d2ey5a_ :     (LEU7)  (VAL114)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1ey5a_ :     (LEU7)  (VAL114)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d3qona_ :     (LEU7)  (LYS116)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d3ejia_ :     (LYS6)  (VAL114)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |automated matches |Staphylococcus aureus [TaxId: 1280]
 d1kdca_ :     (LYS6)  (VAL114)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d2f0fa_ :     (LYS6)  (VAL114)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1kaba_ :     (LYS6)  (VAL114)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d1snda_ :     (LEU7)  (THR120)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]
 d2exza_ :     (LEU7)  (VAL114)   [view usage] : b.40.1.1 |OB-fold |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcal nuclease |Staphylococcus aureus [TaxId: 1280]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.40