Protein Concepts Dictionary

Tableau information

Concept source:  d4dgjc_  amino acid (a.a.) range (ASP92)(SER232)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP92)   (LEU98) E1
	  (ARG124)  (GLY130) E2
	  (LEU144)  (SER153) E3
	  (SER153)  (GLN159) H4
	  (ASN169)  (GLY174) E5
	  (LEU191)  (ASN196) E6
	  (ARG198)  (GLY203) E7
	  (ASN215)  (ALA221) E8
	  (THR227)  (SER232) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2       53.4°   E2                                                      
E3     -144.2°  143.9°   E3                                               
H4      110.0°  -57.9°  100.4°   H4                                        
E5       97.2°  -90.3°  110.5°   70.8°   E5                                 
E6      -79.6°  132.4°  -78.9°  158.2°   88.9°   E6                          
E7      120.2°  -70.5°   76.1°  -34.9° -102.6°  154.9°   E7                   
E8      -48.3°   73.5° -100.0° -120.6°  145.1°  -80.6° -100.7°   E8            
H9      -23.8°   43.2° -133.9°  100.0° -115.1°  -95.8°   99.3°   34.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1zjda1 :   (ASP102)  (GLN243)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor XI |Human (Homo sapiens) [TaxId: 9606]
 d2f9oc_ :   (ASP102)  (HIS240)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3v7ta_ :   (GLU113)  (HIS254)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |beta-Tryptase |Human (Homo sapiens) [TaxId: 9606]
 d4is5a_ :   (ASP102)  (ASN241)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Matriptase MTSP1 |Human (Homo sapiens) [TaxId: 9606]
 d4na7a_ :   (GLU109)  (LYS241)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1eq9a_ :   (ASP102)  (ASN241)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |(alpha,gamma)-chymotrypsin(ogen) |Red fire ant (Solenopsis invicta) [TaxId: 13686]
 d4dgja_ :    (ASP92)  (SER232)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1xxfa_ :   (GLU109)  (LYS241)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor XI |Human (Homo sapiens) [TaxId: 9606]
 d3w94a_ :   (ASP887) (ARG1026)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Oryzias latipes [TaxId: 8090]
 d3beua_ :   (ASP102)  (LEU245)   [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Trypsin |Streptomyces griseus, strain k1 [TaxId: 1911]
 d4dgjc_ :    (ASP92)  (SER232)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1z8ga1 :   (ASP257)  (SER408)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Hepsin, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d3fvfb_ :   (ASP102)  (LEU245)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3sora_ :   (ASP480)  (LYS621)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor XI |Human (Homo sapiens) [TaxId: 9606]
 d1ekbb_ :   (ALA104)  (SER240)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Enteropeptidase (enterokinase light chain) |Cow (Bos taurus) [TaxId: 9913]
 d3dfla_ :   (ASP134)  (GLN289)   [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2f9na_ :   (GLU109)  (HIS240)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4ty6a_ :   (ASP102)  (LYS241)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor XI |Human (Homo sapiens) [TaxId: 9606]
 d1dsta_ :   (ASP102)  (ALA243)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Factor D |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47