Protein Concepts Dictionary

Tableau information

Concept source:  d2j2za2  amino acid (a.a.) range (GLN131)(VAL214)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN131)  (LYS136) E1
	  (ARG142)  (THR147) E2
	  (TYR150)  (GLY155) E3
	  (SER159)  (GLU164) H4
	  (GLU169)  (PRO175) E5
	  (SER177)  (LYS182) E6
	  (THR188)  (ILE194) E7
	  (PRO201)  (CYS207) E8
	  (SER210)  (VAL214) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2      170.6°   E2                                                      
E3      -49.5°  139.7°   E3                                               
H4       99.5°  -77.8°  117.1°   H4                                        
E5      127.9°  -43.8°  152.7°  -90.2°   E5                                 
E6      -38.1°  151.1°  -17.8°  102.2° -162.3°   E6                          
E7      128.9°  -50.2°  127.3°  -30.3°  -77.4°  119.4°   E7                   
E8      -52.4°  122.6°  -78.1°  130.1°   82.5°  -79.8°  150.4°   E8            
E9      154.6°  -34.6°  106.4°  -84.1°  -76.9°  116.5°  -54.7°  140.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2j2za2 :   (GLN131)  (VAL214)   [view usage] : b.7.2.1 |C2 domain-like |Periplasmic chaperone C-domain |Periplasmic chaperone C-domain |PapD |Escherichia coli [TaxId: 562]
 d1qppa2 :   (GLN131)  (VAL214)   [view usage] : b.7.2.1 |C2 domain-like |Periplasmic chaperone C-domain |Periplasmic chaperone C-domain |PapD |Escherichia coli [TaxId: 562]
 d1pdka2 :   (LEU132)  (VAL214)   [view usage] : b.7.2.1 |C2 domain-like |Periplasmic chaperone C-domain |Periplasmic chaperone C-domain |PapD |Escherichia coli [TaxId: 562]
 d3me0a2 :   (GLN131)  (VAL214)   [view usage] : b.7.2.1 |C2 domain-like |Periplasmic chaperone C-domain |Periplasmic chaperone C-domain |PapD |Escherichia coli [TaxId: 562]
 d2w07a2 :   (GLN131)  (VAL214)   [view usage] : b.7.2.1 |C2 domain-like |Periplasmic chaperone C-domain |Periplasmic chaperone C-domain |PapD |Escherichia coli [TaxId: 562]
 d1n0la2 :   (GLN131)  (VAL214)   [view usage] : b.7.2.1 |C2 domain-like |Periplasmic chaperone C-domain |Periplasmic chaperone C-domain |PapD |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.7