Protein Concepts Dictionary

Tableau information

Concept source:  d2d0va_  amino acid (a.a.) range (ASN308)(MET422)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN308)  (GLU314) E1
	  (LYS324)  (ASP330) E2
	  (VAL335)  (ASP339) E3
	  (ILE346)  (ASP352) E4
	  (ASP352)  (PHE358) H5
	  (ASP379)  (ASP384) E6
	  (GLY396)  (ASP401) E7
	  (GLN405)  (MET416) E8
	  (ASP417)  (MET422) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2      155.2°   E2                                                      
E3      -44.2°  159.2°   E3                                               
E4      132.3°  -27.1°  170.5°   E4                                        
H5     -112.7°   83.4°  -77.1°  110.4°   H5                                 
E6       46.7° -113.0°   87.7°  -86.6°  157.1°   E6                          
E7      -11.0°  144.8°  -55.1°  121.3° -122.0°   36.5°   E7                   
E8     -157.9°   21.4°  139.4°  -48.2°   62.4° -131.5°  153.3°   E8            
E9     -116.2°   87.7°  -72.0°  111.1°  -32.5°  154.3° -127.1°   72.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1w6sc_ :  (VAL2309) (MET2422)   [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Methylobacterium extorquens [TaxId: 408]
 d2d0vi_ :   (ASN308)  (MET422)   [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |automated matches |Hyphomicrobium denitrificans [TaxId: 53399]
 d1h4ia_ :   (VAL309)  (MET422)   [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Methylobacterium extorquens [TaxId: 408]
 d1lrwa_ :   (ASN308)  (MET422)   [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Paracoccus denitrificans [TaxId: 266]
 d1h4ja_ :   (VAL309)  (ALA434)   [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Methylobacterium extorquens [TaxId: 408]
 d1g72a_ :   (ASN302)  (MET415)   [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Methylophilus methylotrophus, w3a1 [TaxId: 17]
 d1w6sa_ :   (VAL309)  (MET422)   [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Methylobacterium extorquens [TaxId: 408]
 d2d0va_ :   (ASN308)  (MET422)   [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |automated matches |Hyphomicrobium denitrificans [TaxId: 53399]
 d4tqoa_ :   (TYR337)  (ALA454)   [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |automated matches |Methylococcus capsulatus [TaxId: 243233]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.70