Tableau information
Concept source: d4nbxb_ amino acid (a.a.) range (ALA42)(SER130)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: EEEEEHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA42) (PRO48) E1
(GLU51) (SER59) E2
(ARG63) (ALA68) E3
(ARG74) (ASP80) E4
(VAL86) (SER92) E5
(LYS94) (VAL100) H6
(VAL100) (ALA106) E7
(ALA118) (GLN122) E8
(THR124) (SER130) E9
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 162.1° E2
E3 -18.2° -162.3° E3
E4 134.8° -53.9° 143.6° E4
E5 -52.2° 114.0° -50.5° 159.9° E5
H6 98.8° -92.4° 104.9° -38.7° -149.9° H6
E7 150.2° -47.7° 137.5° -43.9° 143.2° 65.8° E7
E8 -50.3° 114.0° -66.8° 110.9° -56.5° -100.6° 153.1° E8
E9 -59.5° 106.9° -57.2° 155.8° -7.3° -156.9° 137.1° -60.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2p44b_ : (GLY35) (SER121) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Camel (Camelus dromedarius) [TaxId: 9838]
d1uz6e1 : (TYR34) (ILE106) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]
d1mlba1 : (HIS34) (ILE106) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d1qd0a_ : (GLY33) (SER128) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Camelid IG heavy chain variable domain, VHh |Llama (Lama glama) [TaxId: 9844]
d2a9mh_ : (SER40) (SER148) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1qfwm_ : (SER234) (LYS307) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d2cdea1 : (ARG34) (PRO114) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
d4ei5d1 : (TYR35) (GLU115) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4ndma1 : (HIS35) (GLU117) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1a4kb1 : (ASN35) (SER112) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d2p4ab_ : (GLY35) (SER121) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Camel (Camelus dromedarius) [TaxId: 9838]
d1jfqh1 : (GLY333) (SER420) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d4bele_ : (THR194) (SER270) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Llama (Lama glama) [TaxId: 9844]
d4ei5h1 : (TYR35) (GLU115) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4lhug1 : (HIS37) (VAL123) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4j4pd1 : (GLY52) (VAL128) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1fl3b1 : (TYR39) (ARG113) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]
d3ux9d2 : (ALA167) (SER252) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1l7ih1 : (THR33) (VAL111) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Engineered (including hybrid species)
d4iiqa1 : (GLY31) (PRO109) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1