Protein Concepts Dictionary

Tableau information

Concept source:  d3zrcl_  amino acid (a.a.) range (GLU94)(GLU204)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU94)   (PRO99) E1
	  (GLY104)  (ARG108) E2
	  (HIS115)  (ASP121) E3
	  (ASP126)  (ASN131) E4
	  (GLU134)  (PRO138) E5
	  (ILE147)  (LEU153) E6
	  (THR157)  (LEU169) H7
	  (VAL181)  (ASP190) H8
	  (ASN193)  (GLU204) H9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2      109.1°   E2                                                      
E3      -59.4°  160.7°   E3                                               
E4       86.7°  -56.5°  132.0°   E4                                        
E5       80.3°  -29.1°  137.9°   48.5°   E5                                 
E6      -87.4°  159.1°  -28.3°  139.9° -165.0°   E6                          
H7      -64.5°   96.7°  -64.7° -132.7°  -88.3°  -78.5°   H7                   
H8      -74.1°   35.7° -128.0°   60.2°   12.8° -152.8°  -75.6°   H8            
H9      127.2°  -67.8°  131.4°  -45.9°  -81.7°  112.8°  162.4°  -94.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3zrcl_ :    (GLU94)  (GLU204)   [view usage] : b.3.3.1 |Prealbumin-like |VHL |VHL |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1lm8v_ :    (GLU94)  (GLN209)   [view usage] : b.3.3.1 |Prealbumin-like |VHL |VHL |VHL |Human (Homo sapiens) [TaxId: 9606]
 d1vcbc_ :    (GLU94)  (GLN203)   [view usage] : b.3.3.1 |Prealbumin-like |VHL |VHL |VHL |Human (Homo sapiens) [TaxId: 9606]
 d3zunf_ :    (PRO99)  (ARG205)   [view usage] : b.3.3.1 |Prealbumin-like |VHL |VHL |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1lqbc_ :    (GLU94)  (ARG210)   [view usage] : b.3.3.1 |Prealbumin-like |VHL |VHL |VHL |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.3