Protein Concepts Dictionary

Tableau information

Concept source:  d1b2wh2  amino acid (a.a.) range (SER124)(PRO217)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER124)  (PRO130) E1
	  (GLY138)  (ASP148) E2
	  (GLU152)  (TRP158) E3
	  (GLY166)  (PHE170) E4
	  (PRO171)  (SER176) E5
	  (LEU179)  (PRO189) E6
	  (PRO189)  (THR195) H7
	  (TYR198)  (HIS204) E8
	  (ASN208)  (PRO217) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2      167.6°   E2                                                      
E3      -36.4°  151.5°   E3                                               
E4      140.7°  -27.4°  162.8°   E4                                        
E5      123.6°  -44.6°  133.6°  -29.2°   E5                                 
E6      -26.9°  164.4°  -15.8°  167.5°  143.0°   E6                          
H7     -123.6°   62.3°   89.2°  -85.0°  -77.8°  103.5°   H7                   
E8      157.5°  -21.7°  160.8°  -31.6°  -58.6°  158.4°  -78.8°   E8            
E9      -21.8°  149.1°  -39.8°  129.0°  105.1°  -39.3° -111.9°  159.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1tjgh2 :   (THR116)  (PRO213)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Human (Homo sapiens) [TaxId: 9606]
 d1axsb2 :   (SER115)  (LYS214)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Human (Homo sapiens) [TaxId: 9606]
 d1e4xh2 :   (SER117)  (LYS206)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
 d3gsua2 :   (THR182)  (TRP274)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4bswb2 :   (GLN342)  (SER442)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1yqvh1 :   (SER120)  (LEU224)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
 d1cr9h2 :   (SER117)  (PRO209)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
 d3agva2 :   (GLN342)  (LEU443)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ngzb2 :   (SER121)  (PRO214)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Human (Homo sapiens) [TaxId: 9606]
 d1kcsh2 :   (SER123)  (PRO215)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
 d1cloh2 :   (SER120)  (ASP214)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
 d1op5h2 :   (SER120)  (PRO227)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Human (Homo sapiens) [TaxId: 9606]
 d1uj3b2 :   (SER424)  (SER517)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Human (Homo sapiens) [TaxId: 9606]
 d4hafa2 :   (GLN342)  (SER442)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1b2wh2 :   (SER124)  (PRO217)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Human (Homo sapiens) [TaxId: 9606]
 d2ny7h2 :   (SER115)  (PRO227)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Human (Homo sapiens) [TaxId: 9606]
 d1g9mh2 :   (SER135)  (PRO228)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Human (Homo sapiens) [TaxId: 9606]
 d1oqxa2 :   (GLN342)  (SER442)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma |Human (Homo sapiens) [TaxId: 9606]
 d4nqua2 :   (GLN342)  (SER442)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1om3h2 :   (LYS117)  (PRO227)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1