Protein Concepts Dictionary

Tableau information

Concept source:  d1b4va2  amino acid (a.a.) range (ASN323)(ASP443)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN323)  (ALA329) E1
	  (ALA345)  (ALA350) E2
	  (SER357)  (ALA367) E3
	  (TRP372)  (LYS381) E4
	  (PRO383)  (VAL389) E5
	  (ALA397)  (THR402) E6
	  (THR402)  (ASN424) H7
	  (GLY425)  (ASP431) E8
	  (ALA439)  (ASP443) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2       99.2°   E2                                                      
E3      -60.0°  146.7°   E3                                               
E4      153.3°  -56.6°  146.6°   E4                                        
E5      125.0°  116.5°   67.8°  -79.7°   E5                                 
E6      -50.3°   49.0° -106.7°  104.2°  144.4°   E6                          
H7      -32.1°   96.1°  -79.3°  130.5° -145.8°  -53.9°   H7                   
E8      118.6° -115.0°   64.0°  -84.8°    8.5° -136.6°  143.2°   E8            
E9      160.8°  -97.1°  100.9°  -45.8°  -36.9°  145.7°  154.2°   44.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1b4va2 :   (ASN323)  (ASP443)   [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Cholesterol oxidase |Streptomyces sp. [TaxId: 1931]
 d3cnja2 :   (ASN323)  (ASP443)   [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Cholesterol oxidase |Streptomyces sp. (strain SA-COO) (Streptomyces sp. SA-COO) [TaxId: 74576]
 d1cc2a2 :   (ASN323)  (ASP443)   [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Cholesterol oxidase |Streptomyces sp. [TaxId: 1931]
 d1cboa2 :   (ASN323)  (ASP443)   [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Cholesterol oxidase |Streptomyces sp. [TaxId: 1931]
 d1b8sa2 :   (ASN323)  (ASP443)   [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Cholesterol oxidase |Streptomyces sp. [TaxId: 1931]
 d3b3ra2 :   (ASN323)  (ASP443)   [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Cholesterol oxidase |Streptomyces sp. [TaxId: 1931]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.16