Tableau information
Concept source: d43c9a_ amino acid (a.a.) range (VAL3)(TYR92)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL3) (THR7) E1
(SER9) (MET13) E2
(GLN17) (SER26) E3
(TYR32) (PRO40) E4
(SER43) (VAL48) E5
(ARG61) (SER67) E6
(THR69) (ILE75) E7
(GLN79) (ASP85) H8
(ASP85) (TYR92) E9
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 26.1° E2
E3 161.7° 165.5° E3
E4 -54.6° -66.5° 127.5° E4
E5 88.6° 78.0° -88.8° 142.8° E5
E6 136.0° 141.4° -29.5° 144.2° -65.3° E6
E7 -34.8° -29.2° 160.5° -40.5° 106.6° 170.0° E7
H8 -142.8° -168.9° 23.8° 107.0° -106.2° -40.9° -146.9° H8
E9 149.0° 130.3° -35.5° 154.9° -60.8° -36.8° 145.6° 59.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2i25n_ : (ARG2) (GLY90) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]
d2z8wc_ : (ALA1) (PHE86) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Spotted wobbegong (Orectolobus maculatus) [TaxId: 168098]
d1vesa_ : (ALA1) (PRO90) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Novel antigen receptor 12Y-2 |Spotted wobbegong (Orectolobus maculatus) [TaxId: 168098]
d3utpe1 : (VAL4) (SER95) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2i26p_ : (ARG2) (GLY90) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]
d2i26n1 : (ARG2) (GLY90) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Novel antigen receptor (against lysozyme) |Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]
d2uv3a_ : (GLU3) (LYS96) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3fn0l1 : (GLU3) (ARG91) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4jo3l1 : (ILE2) (GLN90) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d4hgma_ : (THR1) (MET86) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Dogfish (Squalus acanthias) [TaxId: 7797]
d2jjta_ : (GLU3) (LYS96) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2coqa_ : (ALA1) (ALA90) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Spotted wobbegong (Orectolobus maculatus) [TaxId: 168098]
d1sq2n_ : (ARG2) (GLY84) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Novel antigen receptor (against lysozyme) |Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]
d2i26o_ : (ARG2) (GLY90) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]
d1bfvh_ : (VAL2) (ARG98) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]
d4kjyb_ : (GLU3) (LYS96) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1aj7l1 : (ILE2) (TYR91) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d4hgkc_ : (THR20) (MET105) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Dogfish (Squalus acanthias) [TaxId: 7797]
d2uv3b_ : (GLU3) (LYS96) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1