Protein Concepts Dictionary

Tableau information

Concept source:  d1jhca_  amino acid (a.a.) range (PHE111)(ASN198)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PHE111)  (GLY117) E1
	  (ASP129)  (HIS134) E2
	  (VAL146)  (ASP150) E3
	  (ASP151)  (VAL155) E4
	  (ARG157)  (GLY162) E5
	  (LYS164)  (GLU170) E6
	  (GLU173)  (VAL179) E7
	  (GLN184)  (GLY190) E8
	  (GLY194)  (ASN198) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2      140.8°   E2                                                      
E3       67.8°  -94.3°   E3                                               
E4      -86.6°  100.0°  152.6°   E4                                        
E5       96.1°  -47.9°   54.3° -122.7°   E5                                 
E6      -74.3°  136.6° -128.0°   47.4°  165.6°   E6                          
E7      125.6°  -29.3°   65.8° -128.8°  -32.3°  159.8°   E7                   
E8     -124.5°   84.0°  159.8°  -46.3° -130.9°   53.1° -108.5°   E8            
E9      -70.5°  145.8°  -86.8°  -94.1°  140.7°  -46.7°  131.5°   83.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1jhha2 :   (PHE111)  (ASN198)   [view usage] : b.87.1.1 |LexA/Signal peptidase |LexA/Signal peptidase |LexA-related |LexA C-terminal domain |Escherichia coli [TaxId: 562]
 d3k2za2 :   (ASP109)  (LEU197)   [view usage] : b.87.1.0 |LexA/Signal peptidase |LexA/Signal peptidase |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
 d1jhca_ :   (PHE111)  (ASN198)   [view usage] : b.87.1.1 |LexA/Signal peptidase |LexA/Signal peptidase |LexA-related |LexA C-terminal domain |Escherichia coli [TaxId: 562]
 d1jhea_ :   (PHE111)  (ASN198)   [view usage] : b.87.1.1 |LexA/Signal peptidase |LexA/Signal peptidase |LexA-related |LexA C-terminal domain |Escherichia coli [TaxId: 562]
 d3jspa2 :   (PHE111)  (ASN198)   [view usage] : b.87.1.1 |LexA/Signal peptidase |LexA/Signal peptidase |LexA-related |automated matches |Escherichia coli K-12 [TaxId: 83333]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.87