Protein Concepts Dictionary

Tableau information

Concept source:  d1jy0a_  amino acid (a.a.) range (PRO11)(SER99)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO11)   (SER17) E1
	   (PHE22)   (ASP28) E2
	   (ASP32)   (ARG35) E3
	   (GLN43)   (ALA48) E4
	   (GLU53)   (SER58) E5
	   (GLY62)   (MET67) E6
	   (GLY71)   (GLY75) E7
	   (LEU84)   (LEU89) E8
	   (TYR94)   (SER99) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2      118.5°   E2                                                      
E3      -75.4°  143.8°   E3                                               
E4       99.9°   99.6° -111.2°   E4                                        
E5      -96.5°  -64.6°   81.3°  161.5°   E5                                 
E6       32.4°  110.2°  -98.2°  -70.2°  123.0°   E6                          
E7     -144.3°  -67.0°   82.8°  114.4°  -51.8°  174.6°   E7                   
E8       63.8° -165.8°  -22.3°  -93.5°  101.5°   79.3° -102.7°   E8            
E9     -102.8°   34.3° -176.2°   72.3°  -95.7°  -81.5°   97.2°  159.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1bfga_ :    (PRO20)  (SER108)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Basic FGF (FGF2) |Human (Homo sapiens) [TaxId: 9606]
 d3f1ra_ :    (ARG66)  (SER153)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1blaa_ :    (ASP28)  (SER117)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Basic FGF (FGF2) |Human (Homo sapiens) [TaxId: 9606]
 d1g82c_ :    (ARG63)  (SER150)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Fibroblast growth factor 9, FGF9 |Human (Homo sapiens) [TaxId: 9606]
 d2uusa_ :    (PRO11)   (SER99)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3o3qb_ :    (LYS10)   (SER99)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d4oeea_ :    (PRO20)  (SER108)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Basic FGF (FGF2) |Human (Homo sapiens) [TaxId: 9606]
 d2fgfa_ :    (LYS21)  (SER108)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Basic FGF (FGF2) |Human (Homo sapiens) [TaxId: 9606]
 d1g82b_ :    (ARG63)  (SER150)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Fibroblast growth factor 9, FGF9 |Human (Homo sapiens) [TaxId: 9606]
 d1bffa_ :    (PRO28)  (SER116)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Basic FGF (FGF2) |Human (Homo sapiens) [TaxId: 9606]
 d1ev2a_ :    (PRO20)  (SER108)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Basic FGF (FGF2) |Human (Homo sapiens) [TaxId: 9606]
 d3o3qc_ :    (PRO11)   (SER99)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d2bfha_ :    (PRO20)  (SER108)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Basic FGF (FGF2) |Human (Homo sapiens) [TaxId: 9606]
 d1q1ua_ :     (LEU8)   (SER99)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Fibrobast growth factor homologous factor 1 (FHF1b, FGF12b) |Human (Homo sapiens) [TaxId: 9606]
 d1basa_ :    (ASP20)  (SER109)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Basic FGF (FGF2) |Human (Homo sapiens) [TaxId: 9606]
 d1fgaa_ :    (PRO20)  (SER108)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Basic FGF (FGF2) |Human (Homo sapiens) [TaxId: 9606]
 d1g82d_ :    (ARG63)  (SER150)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Fibroblast growth factor 9, FGF9 |Human (Homo sapiens) [TaxId: 9606]
 d1bfba_ :    (PRO21)  (SER109)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Basic FGF (FGF2) |Human (Homo sapiens) [TaxId: 9606]
 d3o3qa_ :    (LYS10)   (SER99)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.42