Tableau information
Concept source: d4jaml1 amino acid (a.a.) range (PRO8)(VAL106)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO8) (SER14) E1
(THR18) (SER24) E2
(ASN32) (PRO40) E3
(SER43) (ILE48) E4
(TYR52) (SER56) E5
(PHE62) (GLY68) E6
(SER69) (GLY77) E7
(ASP85) (TRP91) E8
(THR95) (VAL106) E9
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 167.1° E2
E3 -73.0° 119.4° E3
E4 79.5° -87.7° 148.6° E4
E5 -72.4° 116.5° -56.5° 128.0° E5
E6 133.6° -35.1° 137.2° -58.6° 149.2° E6
E7 -28.0° 164.6° -47.8° 107.2° -51.1° 159.2° E7
E8 132.1° -38.3° 148.2° -63.2° 107.3° -44.9° 146.5° E8
E9 -30.5° 154.2° -52.6° 96.1° -81.0° 129.8° -31.0° 158.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1l6za1 : (VAL2) (HIS107) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), N-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d2qhld_ : (HIS7) (PHE111) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Ictalurus punctatus [TaxId: 7998]
d3b5ta_ : (ILE3) (PHE111) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Ictalurus punctatus [TaxId: 7998]
d4mnge2 : (THR147) (GLY247) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hnga1 : (GLY4) (GLU99) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |CD2, first domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3f12a1 : (ALA9) (LYS108) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2qtea_ : (HIS7) (PHE111) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Ictalurus punctatus [TaxId: 7998]
d2q3ab_ : (GLN2) (SER105) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Macaca mulatta [TaxId: 9541]
d1cida1 : (THR1) (VAL105) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |CD4 V-set domains |Rat (Rattus rattus) [TaxId: 10117]
d3b5td_ : (ASP2) (PHE111) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Ictalurus punctatus [TaxId: 7998]
d3b5tb_ : (LYS4) (PHE111) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Ictalurus punctatus [TaxId: 7998]
d4jaml1 : (PRO8) (VAL106) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2qqqa_ : (HIS7) (PHE111) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Ictalurus punctatus [TaxId: 7998]
d2or7b_ : (THR5) (PRO110) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2qjda_ : (ILE3) (PHE111) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Ictalurus punctatus [TaxId: 7998]
d2q3aa_ : (GLY9) (LEU112) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Macaca mulatta [TaxId: 9541]
d1npua_ : (ALA7) (GLU113) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Programmed cell death protein 1, PD1, extracellular domain |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1