Protein Concepts Dictionary

Tableau information

Concept source:  d1iakb1  amino acid (a.a.) range (ARG93)(ALA190)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG93)  (LEU103) E1
	  (HIS112)  (THR120) E2
	  (LYS126)  (PHE132) E3
	  (GLY141)  (THR145) E4
	  (LEU147)  (GLY151) E5
	  (TRP153)  (GLU162) E6
	  (GLU162)  (ARG167) E7
	  (GLY168)  (HIS177) E8
	  (ILE184)  (ALA190) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2      160.9°   E2                                                      
E3      -24.5°  152.5°   E3                                               
E4      132.3°  -37.2°  151.5°   E4                                        
E5      121.5°  -41.7°  133.3°   21.8°   E5                                 
E6      -27.7°  166.1°  -21.8°  156.6°  149.1°   E6                          
E7      -65.7°  105.0°   47.6° -122.4° -101.5°   67.7°   E7                   
E8      161.2°  -28.2°  171.1°  -37.3°  -54.6°  153.1° -131.9°   E8            
E9       -3.8°  157.1°  -26.4°  129.1°  117.7°  -31.5°  -64.9°  160.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4h25b2 :    (GLN98)  (ALA190)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2z31d1 :    (LEU94)  (ARG189)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class II MHC beta chain, C-terminal domain |Mouse (Mus musculus), I-A group [TaxId: 10090]
 d2pxyd1 :    (LEU94)  (ARG189)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class II MHC beta chain, C-terminal domain |Mouse (Mus musculus), I-A group [TaxId: 10090]
 d4i5bb2 :    (VAL99)  (ALA190)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class II MHC beta chain, C-terminal domain |Human (Homo sapiens), HLA-DR group [TaxId: 9606]
 d1a6ab1 :    (HIS96)  (ALA190)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class II MHC beta chain, C-terminal domain |Human (Homo sapiens), HLA-DR group [TaxId: 9606]
 d1iakb1 :    (ARG93)  (ALA190)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class II MHC beta chain, C-terminal domain |Mouse (Mus musculus), I-A group [TaxId: 10090]
 d1aqdb1 :    (VAL99)  (ALA190)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class II MHC beta chain, C-terminal domain |Human (Homo sapiens), HLA-DR group [TaxId: 9606]
 d1i3rb1 :   (VAL121)  (ALA216)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class II MHC beta chain, C-terminal domain |Mouse (Mus musculus), I-E group [TaxId: 10090]
 d1lnub1 :   (LEU121)  (LYS216)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class II MHC beta chain, C-terminal domain |Mouse (Mus musculus), I-A group [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1