Tableau information
Concept source: d2vnva_ amino acid (a.a.) range (ARG9)(TRP125)
nSSEs in this Concept: 9
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG9) (ILE15) E1
(PHE21) (ALA27) E2
(GLN33) (ILE39) E3
(ALA46) (LYS50) E4
(GLY56) (THR61) E5
(GLY67) (VAL73) E6
(ALA81) (LYS92) E7
(SER97) (GLY111) E8
(GLY119) (TRP125) E9
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 152.7° E2
E3 -41.0° 166.0° E3
E4 137.9° -14.8° 177.5° E4
E5 -43.7° 163.6° -4.9° 177.5° E5
E6 154.8° -7.9° 162.8° -19.0° 158.9° E6
E7 22.7° 131.5° -61.2° 117.3° -64.6° 136.0° E7
E8 -169.2° -32.6° 135.0° -46.6° 131.5° -27.8° 163.8° E8
E9 10.0° 161.7° -31.6° 147.2° -34.6° 164.8° -30.2° 165.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1gzta_ : (GLY4) (PRO112) [view usage] : b.115.1.1 |Calcium-mediated lectin |Calcium-mediated lectin |Calcium-mediated lectin |Fucose-binding lectin II (PA-LII) |Pseudomonas aeruginosa [TaxId: 287]
d2wr9b_ : (ALA10) (TRP125) [view usage] : b.115.1.0 |Calcium-mediated lectin |Calcium-mediated lectin |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2wr9d_ : (ALA10) (TRP125) [view usage] : b.115.1.0 |Calcium-mediated lectin |Calcium-mediated lectin |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2vnvb_ : (GLU12) (TRP125) [view usage] : b.115.1.0 |Calcium-mediated lectin |Calcium-mediated lectin |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2wr9a_ : (GLY11) (TRP125) [view usage] : b.115.1.0 |Calcium-mediated lectin |Calcium-mediated lectin |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2jdma_ : (GLY4) (PRO112) [view usage] : b.115.1.1 |Calcium-mediated lectin |Calcium-mediated lectin |Calcium-mediated lectin |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2vnvc_ : (GLU12) (TRP125) [view usage] : b.115.1.0 |Calcium-mediated lectin |Calcium-mediated lectin |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2xr4a_ : (ASP3) (ASN111) [view usage] : b.115.1.0 |Calcium-mediated lectin |Calcium-mediated lectin |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d4aoca_ : (GLU12) (TRP125) [view usage] : b.115.1.0 |Calcium-mediated lectin |Calcium-mediated lectin |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d4aocd_ : (GLY11) (TRP125) [view usage] : b.115.1.0 |Calcium-mediated lectin |Calcium-mediated lectin |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2vnva_ : (ARG9) (TRP125) [view usage] : b.115.1.0 |Calcium-mediated lectin |Calcium-mediated lectin |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2wr9c_ : (GLY11) (TRP125) [view usage] : b.115.1.0 |Calcium-mediated lectin |Calcium-mediated lectin |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.115