Protein Concepts Dictionary

Tableau information

Concept source:  d2fhra2  amino acid (a.a.) range (SER16)(LYS116)

nSSEs in this Concept: 9

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER16)   (GLU22) E1
	   (GLY25)   (GLU29) E2
	   (HIS33)   (VAL41) E3
	   (VAL46)   (GLU56) E4
	   (GLU65)   (ASP73) E5
	   (ALA76)   (ILE82) E6
	   (ALA83)   (ALA89) E7
	   (SER93)  (LYS103) E8
	  (ASN105)  (LYS116) E9

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                             
E2      163.3°   E2                                                      
E3       97.9°  -98.7°   E3                                               
E4      -71.8°   92.8°  157.3°   E4                                        
E5      126.4°  -65.3°  -51.7°  150.2°   E5                                 
E6      -28.6°  140.1°  113.1°  -49.5°  154.5°   E6                          
E7      -50.8°  115.5°  134.9°  -25.0° -170.8°  -25.0°   E7                   
E8      110.3°  -86.0°  -15.6° -169.5°  -36.6°  128.4°  150.4°   E8            
E9      -68.5°   97.2°  147.7°   -9.7°  159.0°  -43.4°  -18.4°  160.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ms5a2 :    (VAL18)  (SER115)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Trypanosoma sialidase |Trypanosoma cruzi [TaxId: 5693]
 d2a75a2 :    (SER16)  (LYS116)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Trypanosoma rangeli [TaxId: 5698]
 d3b69a2 :    (VAL18)  (VAL110)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Trypanosoma sialidase |Trypanosoma cruzi [TaxId: 5693]
 d1n1sa2 :    (SER19)  (LYS119)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Trypanosoma sialidase |Trypanosoma rangeli [TaxId: 5698]
 d3pjqa1 :    (VAL18)  (VAL110)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d1ms0a2 :    (VAL18)  (ASN114)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Trypanosoma sialidase |Trypanosoma cruzi [TaxId: 5693]
 d1s0ia2 :    (VAL18)  (VAL110)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Trypanosoma sialidase |Trypanosoma cruzi [TaxId: 5693]
 d1mz5a2 :    (SER16)  (GLY104)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Trypanosoma sialidase |Trypanosoma rangeli [TaxId: 5698]
 d2fhra2 :    (SER16)  (LYS116)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Trypanosoma rangeli [TaxId: 5698]
 d1mr5a2 :    (VAL18)  (SER115)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Trypanosoma sialidase |Trypanosoma cruzi [TaxId: 5693]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.68