Protein Concepts Dictionary

Tableau information

Concept source:  d3rica_  amino acid (a.a.) range (THR20)(LYS167)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR20)   (LEU37) H1
	   (SER39)   (ASN63) H2
	   (THR69)   (MET80) H3
	   (GLY82)   (LYS87) H4
	   (THR91)  (GLY114) H5
	  (ARG125)  (LEU136) H6
	  (TRP142)  (ALA155) H7
	  (TYR157)  (LYS167) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2     -166.1°   H2                                               
H3      -99.6°   73.7°   H3                                        
H4       37.6° -148.4°  137.1°   H4                                 
H5       58.6° -132.5° -147.2°  -26.4°   H5                          
H6     -140.7°   36.2°  -41.7° -171.8°  147.8°   H6                   
H7       64.3° -117.5°  156.0°  -31.9°  -39.8°  153.7°   H7            
H8      132.2°  -39.7°   97.2°  114.8° -115.6°   72.3°   83.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ghpa_ :    (THR20)  (SER166)   [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Human (Homo sapiens) [TaxId: 9606]
 d4gh0a_ :    (VAL27)  (ALA164)   [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Human (Homo sapiens) [TaxId: 9606]
 d3rwvb_ :    (THR20)  (LYS167)   [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Human (Homo sapiens) [TaxId: 9606]
 d3s0ka_ :    (GLY21)  (SER166)   [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Human (Homo sapiens) [TaxId: 9606]
 d3rica_ :    (THR20)  (LYS167)   [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Human (Homo sapiens) [TaxId: 9606]
 d2bv7a_ :    (THR20)  (SER166)   [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d1tfja_ :    (THR20)  (LYS167)   [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Cow (Bos taurus) [TaxId: 9913]
 d4gixa_ :    (THR20)  (SER166)   [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Human (Homo sapiens) [TaxId: 9606]
 d4gvta_ :    (THR20)  (SER166)   [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.224