Protein Concepts Dictionary

Tableau information

Concept source:  d1y8na1  amino acid (a.a.) range (PRO13)(GLY173)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO13)   (PHE22) H1
	   (SER28)   (GLY36) H2
	   (GLU42)   (LEU67) H3
	   (PRO68)   (ARG74) H4
	   (PRO75)   (SER98) H5
	  (PRO102)  (ASN120) H6
	  (VAL122)  (GLY138) H7
	  (ILE143)  (GLY173) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2      104.7°   H2                                               
H3     -107.0° -146.6°   H3                                        
H4      114.0°  -26.6° -125.3°   H4                                 
H5       80.1°   47.7° -149.5°  -74.2°   H5                          
H6      -92.7° -136.8°   32.2°  110.2° -172.7°   H6                   
H7     -102.7°  151.7°    5.6°  130.9° -146.2°   34.3°   H7            
H8       87.8°  -17.1° -163.1°  -38.2°   39.5° -142.2°  168.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2btza1 :     (SER7)  (PHE168)   [view usage] : a.29.5.1 |Bromodomain-like |alpha-ketoacid dehydrogenase kinase, N-terminal domain |alpha-ketoacid dehydrogenase kinase, N-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1y8na1 :    (PRO13)  (GLY173)   [view usage] : a.29.5.1 |Bromodomain-like |alpha-ketoacid dehydrogenase kinase, N-terminal domain |alpha-ketoacid dehydrogenase kinase, N-terminal domain |Pyruvate dehydrogenase kinase |Human (Homo sapiens) [TaxId: 9606]
 d1y8oa1 :    (PRO13)  (GLY173)   [view usage] : a.29.5.1 |Bromodomain-like |alpha-ketoacid dehydrogenase kinase, N-terminal domain |alpha-ketoacid dehydrogenase kinase, N-terminal domain |Pyruvate dehydrogenase kinase |Human (Homo sapiens) [TaxId: 9606]
 d4v26a1 :     (SER7)  (ASP169)   [view usage] : a.29.5.1 |Bromodomain-like |alpha-ketoacid dehydrogenase kinase, N-terminal domain |alpha-ketoacid dehydrogenase kinase, N-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3crka1 :    (ALA16)  (ASP177)   [view usage] : a.29.5.1 |Bromodomain-like |alpha-ketoacid dehydrogenase kinase, N-terminal domain |alpha-ketoacid dehydrogenase kinase, N-terminal domain |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.29