Protein Concepts Dictionary

Tableau information

Concept source:  d1yfdb_  amino acid (a.a.) range (ASP34)(ARG149)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP34)   (PHE47) H1
	   (VAL55)   (LEU65) H2
	   (PRO66)   (PHE73) H3
	   (ILE74)   (LEU95) H4
	   (LEU95)   (ILE99) H5
	  (PRO102)  (ILE129) H6
	  (PRO133)  (ASN143) H7
	  (ASN143)  (ARG149) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                      
H2       87.3°   H2                                               
H3     -133.8° -132.0°   H3                                        
H4     -133.2° -130.4°   -3.0°   H4                                 
H5     -129.2°  142.1°  -29.5°  -32.4°   H5                          
H6       28.1°  -59.2° -155.7° -153.6° -156.3°   H6                   
H7      154.8°   68.2°  -66.8°  -66.4°   76.0°  127.0°   H7            
H8      154.5°  110.9°  -43.6°  -45.8°   31.4°  160.6°  -48.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1pfra_ :    (ASP34)  (GLU151)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
 d1yfdb_ :    (ASP34)  (ARG149)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
 d2av8a_ :    (PHE36)  (LEU169)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
 d1jprb_ :    (ASP34)  (ARG149)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
 d1piya_ :    (PHE36)  (ALA150)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
 d1av8a_ :    (PHE36)  (GLY171)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25